Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Gm26035-201ENSMUST00000083065 308 ntBASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Gm8805-201ENSMUST00000117848 313 ntBASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Gm13123-201ENSMUST00000122173 492 ntBASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Gm38671-201ENSMUST00000200573 130 ntBASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Gm45668-201ENSMUST00000211271 493 ntBASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Chmp2bQ8BJF9 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Chmp2bQ8BJF9 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms