Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.03□□□□□ -0.64
Slc5a7Q8BGY9 Gm14760-201ENSMUST00000121831 999 ntBASIC11.03□□□□□ -0.64
Slc5a7Q8BGY9 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc5a7Q8BGY9 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Slc5a7Q8BGY9 Gm42550-201ENSMUST00000201553 960 ntBASIC11.03□□□□□ -0.64
Slc5a7Q8BGY9 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Slc5a7Q8BGY9 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc5a7Q8BGY9 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Slc5a7Q8BGY9 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.03□□□□□ -0.64
Slc5a7Q8BGY9 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc5a7Q8BGY9 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc5a7Q8BGY9 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.03□□□□□ -0.64
Slc5a7Q8BGY9 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc5a7Q8BGY9 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc5a7Q8BGY9 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc5a7Q8BGY9 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Slc5a7Q8BGY9 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.03□□□□□ -0.64
Slc5a7Q8BGY9 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc5a7Q8BGY9 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Slc5a7Q8BGY9 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Slc5a7Q8BGY9 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc5a7Q8BGY9 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc5a7Q8BGY9 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc5a7Q8BGY9 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.03□□□□□ -0.64
Slc5a7Q8BGY9 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Slc5a7Q8BGY9 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Slc5a7Q8BGY9 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Slc5a7Q8BGY9 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Slc5a7Q8BGY9 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Slc5a7Q8BGY9 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Slc5a7Q8BGY9 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Slc5a7Q8BGY9 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Slc5a7Q8BGY9 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Slc5a7Q8BGY9 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Slc5a7Q8BGY9 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Slc5a7Q8BGY9 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.02□□□□□ -0.65
Slc5a7Q8BGY9 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Slc5a7Q8BGY9 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Slc5a7Q8BGY9 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Slc5a7Q8BGY9 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Slc5a7Q8BGY9 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Slc5a7Q8BGY9 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Slc5a7Q8BGY9 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Slc5a7Q8BGY9 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Slc5a7Q8BGY9 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Slc5a7Q8BGY9 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Slc5a7Q8BGY9 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Slc5a7Q8BGY9 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Slc5a7Q8BGY9 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Slc5a7Q8BGY9 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Slc5a7Q8BGY9 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.01□□□□□ -0.65
Slc5a7Q8BGY9 Gm14767-201ENSMUST00000121559 586 ntBASIC11.01□□□□□ -0.65
Slc5a7Q8BGY9 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Slc5a7Q8BGY9 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Slc5a7Q8BGY9 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Slc5a7Q8BGY9 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.01□□□□□ -0.65
Slc5a7Q8BGY9 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.01□□□□□ -0.65
Slc5a7Q8BGY9 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.01□□□□□ -0.65
Slc5a7Q8BGY9 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Slc5a7Q8BGY9 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Slc5a7Q8BGY9 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Slc5a7Q8BGY9 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Slc5a7Q8BGY9 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Slc5a7Q8BGY9 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Slc5a7Q8BGY9 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms