Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim50Q810I2 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim50Q810I2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim50Q810I2 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.3□□□□□ -0.44
Trim50Q810I2 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trim50Q810I2 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim50Q810I2 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.3□□□□□ -0.44
Trim50Q810I2 Gm25261-201ENSMUST00000157416 134 ntBASIC12.3□□□□□ -0.44
Trim50Q810I2 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim50Q810I2 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trim50Q810I2 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim50Q810I2 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trim50Q810I2 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.3□□□□□ -0.44
Trim50Q810I2 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim50Q810I2 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trim50Q810I2 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim50Q810I2 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim50Q810I2 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim50Q810I2 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim50Q810I2 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim50Q810I2 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim50Q810I2 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim50Q810I2 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim50Q810I2 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.3□□□□□ -0.44
Trim50Q810I2 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim50Q810I2 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim50Q810I2 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim50Q810I2 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim50Q810I2 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.3□□□□□ -0.44
Trim50Q810I2 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim50Q810I2 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.3□□□□□ -0.44
Trim50Q810I2 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim50Q810I2 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim50Q810I2 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim50Q810I2 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim50Q810I2 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim50Q810I2 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim50Q810I2 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim50Q810I2 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim50Q810I2 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim50Q810I2 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim50Q810I2 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trim50Q810I2 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim50Q810I2 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim50Q810I2 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trim50Q810I2 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim50Q810I2 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim50Q810I2 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim50Q810I2 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim50Q810I2 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim50Q810I2 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim50Q810I2 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trim50Q810I2 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.29□□□□□ -0.44
Trim50Q810I2 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim50Q810I2 Snora78-201ENSMUST00000158630 128 ntBASIC12.29□□□□□ -0.44
Trim50Q810I2 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim50Q810I2 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.29□□□□□ -0.44
Trim50Q810I2 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.29□□□□□ -0.44
Trim50Q810I2 Gm27514-201ENSMUST00000183692 110 ntBASIC12.29□□□□□ -0.44
Trim50Q810I2 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim50Q810I2 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim50Q810I2 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.29□□□□□ -0.44
Trim50Q810I2 AY702102-202ENSMUST00000194651 1173 ntBASIC12.29□□□□□ -0.44
Trim50Q810I2 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.29□□□□□ -0.44
Trim50Q810I2 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim50Q810I2 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.29□□□□□ -0.44
Trim50Q810I2 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim50Q810I2 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim50Q810I2 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim50Q810I2 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim50Q810I2 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim50Q810I2 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim50Q810I2 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim50Q810I2 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.29□□□□□ -0.44
Trim50Q810I2 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim50Q810I2 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim50Q810I2 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim50Q810I2 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim50Q810I2 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim50Q810I2 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim50Q810I2 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim50Q810I2 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim50Q810I2 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim50Q810I2 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim50Q810I2 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim50Q810I2 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim50Q810I2 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim50Q810I2 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim50Q810I2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trim50Q810I2 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim50Q810I2 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim50Q810I2 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim50Q810I2 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim50Q810I2 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trim50Q810I2 Gm23931-201ENSMUST00000103842 109 ntBASIC12.28□□□□□ -0.44
Trim50Q810I2 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim50Q810I2 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim50Q810I2 Gm7809-201ENSMUST00000153199 742 ntBASIC12.28□□□□□ -0.44
Trim50Q810I2 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim50Q810I2 Gm3890-201ENSMUST00000182416 207 ntBASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms