Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Usp8Q80U87 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp8Q80U87 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp8Q80U87 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp8Q80U87 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp8Q80U87 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Usp8Q80U87 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Usp8Q80U87 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Usp8Q80U87 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp8Q80U87 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Usp8Q80U87 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp8Q80U87 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp8Q80U87 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp8Q80U87 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp8Q80U87 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp8Q80U87 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp8Q80U87 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Usp8Q80U87 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp8Q80U87 Gm11618-201ENSMUST00000117946 267 ntBASIC12.67□□□□□ -0.38
Usp8Q80U87 Gm23984-201ENSMUST00000157139 203 ntBASIC12.67□□□□□ -0.38
Usp8Q80U87 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Usp8Q80U87 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp8Q80U87 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.67□□□□□ -0.38
Usp8Q80U87 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.67□□□□□ -0.38
Usp8Q80U87 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.67□□□□□ -0.38
Usp8Q80U87 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.67□□□□□ -0.38
Usp8Q80U87 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp8Q80U87 Gm7287-201ENSMUST00000205267 602 ntBASIC12.67□□□□□ -0.38
Usp8Q80U87 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.67□□□□□ -0.38
Usp8Q80U87 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.67□□□□□ -0.38
Usp8Q80U87 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp8Q80U87 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp8Q80U87 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.67□□□□□ -0.38
Usp8Q80U87 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp8Q80U87 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp8Q80U87 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp8Q80U87 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp8Q80U87 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp8Q80U87 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Usp8Q80U87 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Usp8Q80U87 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp8Q80U87 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Usp8Q80U87 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp8Q80U87 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp8Q80U87 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.67□□□□□ -0.38
Usp8Q80U87 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp8Q80U87 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Usp8Q80U87 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp8Q80U87 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp8Q80U87 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.67□□□□□ -0.38
Usp8Q80U87 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Usp8Q80U87 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp8Q80U87 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.66□□□□□ -0.38
Usp8Q80U87 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 Gm11918-201ENSMUST00000121660 179 ntBASIC12.66□□□□□ -0.38
Usp8Q80U87 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.66□□□□□ -0.38
Usp8Q80U87 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.66□□□□□ -0.38
Usp8Q80U87 Gm45384-201ENSMUST00000210451 277 ntBASIC12.66□□□□□ -0.38
Usp8Q80U87 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.66□□□□□ -0.38
Usp8Q80U87 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Usp8Q80U87 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Usp8Q80U87 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Usp8Q80U87 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Usp8Q80U87 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Usp8Q80U87 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.66□□□□□ -0.38
Usp8Q80U87 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp8Q80U87 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.66□□□□□ -0.38
Usp8Q80U87 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp8Q80U87 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp8Q80U87 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Usp8Q80U87 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.65□□□□□ -0.38
Usp8Q80U87 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 290.5 ms