Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.72□□□□□ -0.53
Pif1Q80SX8 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.72□□□□□ -0.53
Pif1Q80SX8 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.72□□□□□ -0.53
Pif1Q80SX8 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Gm11439-201ENSMUST00000118598 409 ntBASIC11.72□□□□□ -0.53
Pif1Q80SX8 Gm13875-201ENSMUST00000120162 282 ntBASIC11.72□□□□□ -0.53
Pif1Q80SX8 Gm13570-201ENSMUST00000140763 309 ntBASIC11.72□□□□□ -0.53
Pif1Q80SX8 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Pif1Q80SX8 AA914427-201ENSMUST00000193194 1166 ntBASIC11.72□□□□□ -0.53
Pif1Q80SX8 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Gm19208-201ENSMUST00000213861 912 ntBASIC11.72□□□□□ -0.53
Pif1Q80SX8 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pif1Q80SX8 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pif1Q80SX8 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.71□□□□□ -0.53
Pif1Q80SX8 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Gm14028-201ENSMUST00000117434 479 ntBASIC11.71□□□□□ -0.53
Pif1Q80SX8 Gm4909-201ENSMUST00000118749 794 ntBASIC11.71□□□□□ -0.53
Pif1Q80SX8 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pif1Q80SX8 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.71□□□□□ -0.53
Pif1Q80SX8 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Gm3096-201ENSMUST00000185770 364 ntBASIC11.71□□□□□ -0.53
Pif1Q80SX8 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.71□□□□□ -0.53
Pif1Q80SX8 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pif1Q80SX8 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.71□□□□□ -0.54
Pif1Q80SX8 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pif1Q80SX8 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pif1Q80SX8 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.71□□□□□ -0.54
Pif1Q80SX8 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pif1Q80SX8 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pif1Q80SX8 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.71□□□□□ -0.54
Pif1Q80SX8 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms