Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Gm15881-201ENSMUST00000148792 942 ntBASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Gm23085-201ENSMUST00000157849 293 ntBASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Gm7593-201ENSMUST00000187246 644 ntBASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Gm3332-201ENSMUST00000189337 928 ntBASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Mir7686-201ENSMUST00000200604 57 ntBASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Gm45550-201ENSMUST00000209380 946 ntBASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Gm4797-201ENSMUST00000219075 1283 ntBASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Gm807-202ENSMUST00000224929 408 ntBASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx55Q6ZPL9 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Gm4993-201ENSMUST00000118719 1174 ntBASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Gm43184-201ENSMUST00000197247 542 ntBASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Gm6781-201ENSMUST00000038304 1242 ntBASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.28□□□□□ -0.12
Ddx55Q6ZPL9 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx55Q6ZPL9 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.27□□□□□ -0.12
Ddx55Q6ZPL9 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx55Q6ZPL9 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx55Q6ZPL9 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx55Q6ZPL9 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx55Q6ZPL9 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx55Q6ZPL9 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx55Q6ZPL9 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx55Q6ZPL9 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx55Q6ZPL9 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx55Q6ZPL9 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ddx55Q6ZPL9 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ddx55Q6ZPL9 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.27□□□□□ -0.12
Ddx55Q6ZPL9 Gm24891-201ENSMUST00000104391 136 ntBASIC14.27□□□□□ -0.13
Ddx55Q6ZPL9 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC14.27□□□□□ -0.13
Ddx55Q6ZPL9 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC14.27□□□□□ -0.13
Ddx55Q6ZPL9 Gm5778-201ENSMUST00000171003 1072 ntBASIC14.27□□□□□ -0.13
Ddx55Q6ZPL9 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ddx55Q6ZPL9 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC14.27□□□□□ -0.13
Ddx55Q6ZPL9 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC14.27□□□□□ -0.13
Ddx55Q6ZPL9 Gm6905-201ENSMUST00000205729 511 ntBASIC14.27□□□□□ -0.13
Ddx55Q6ZPL9 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.27□□□□□ -0.13
Ddx55Q6ZPL9 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms