Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Vsx2Q61412 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx2Q61412 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx2Q61412 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx2Q61412 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx2Q61412 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx2Q61412 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx2Q61412 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx2Q61412 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Vsx2Q61412 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx2Q61412 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx2Q61412 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx2Q61412 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.31□□□□□ -0.44
Vsx2Q61412 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Vsx2Q61412 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx2Q61412 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Vsx2Q61412 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Vsx2Q61412 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx2Q61412 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.3□□□□□ -0.44
Vsx2Q61412 Rubie-203ENSMUST00000227803 2430 ntBASIC12.3□□□□□ -0.44
Vsx2Q61412 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.3□□□□□ -0.44
Vsx2Q61412 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx2Q61412 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Vsx2Q61412 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx2Q61412 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx2Q61412 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Vsx2Q61412 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx2Q61412 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx2Q61412 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx2Q61412 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Vsx2Q61412 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.3□□□□□ -0.44
Vsx2Q61412 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx2Q61412 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
Vsx2Q61412 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx2Q61412 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.3□□□□□ -0.44
Vsx2Q61412 Gm25927-201ENSMUST00000175058 117 ntBASIC12.3□□□□□ -0.44
Vsx2Q61412 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.3□□□□□ -0.44
Vsx2Q61412 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.3□□□□□ -0.44
Vsx2Q61412 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx2Q61412 Gm45880-201ENSMUST00000213041 853 ntBASIC12.3□□□□□ -0.44
Vsx2Q61412 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx2Q61412 Gm9899-201ENSMUST00000065519 555 ntBASIC12.3□□□□□ -0.44
Vsx2Q61412 Gm10478-201ENSMUST00000084451 396 ntBASIC12.3□□□□□ -0.44
Vsx2Q61412 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx2Q61412 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx2Q61412 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx2Q61412 Matn2-203ENSMUST00000226766 3252 ntBASIC12.3□□□□□ -0.44
Vsx2Q61412 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.3□□□□□ -0.44
Vsx2Q61412 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx2Q61412 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx2Q61412 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx2Q61412 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx2Q61412 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.3□□□□□ -0.44
Vsx2Q61412 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx2Q61412 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx2Q61412 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.3□□□□□ -0.44
Vsx2Q61412 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Vsx2Q61412 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx2Q61412 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx2Q61412 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx2Q61412 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Vsx2Q61412 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx2Q61412 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx2Q61412 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx2Q61412 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx2Q61412 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx2Q61412 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx2Q61412 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx2Q61412 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx2Q61412 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.29□□□□□ -0.44
Vsx2Q61412 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.29□□□□□ -0.44
Vsx2Q61412 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.29□□□□□ -0.44
Vsx2Q61412 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx2Q61412 Gm19184-201ENSMUST00000196798 928 ntBASIC12.29□□□□□ -0.44
Vsx2Q61412 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.29□□□□□ -0.44
Vsx2Q61412 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx2Q61412 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Vsx2Q61412 Snora73a-201ENSMUST00000082453 205 ntBASIC12.29□□□□□ -0.44
Vsx2Q61412 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx2Q61412 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.29□□□□□ -0.44
Vsx2Q61412 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx2Q61412 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx2Q61412 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx2Q61412 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx2Q61412 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx2Q61412 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx2Q61412 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx2Q61412 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx2Q61412 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx2Q61412 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.29□□□□□ -0.44
Vsx2Q61412 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx2Q61412 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx2Q61412 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
Vsx2Q61412 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx2Q61412 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx2Q61412 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx2Q61412 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx2Q61412 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx2Q61412 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx2Q61412 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms