Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gm42599-201ENSMUST00000201308 469 ntBASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 AW822252-206ENSMUST00000208904 237 ntBASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 AC132317.1-201ENSMUST00000227227 962 ntBASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 AC192088.1-201ENSMUST00000227561 301 ntBASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gm42943-201ENSMUST00000199676 3242 ntBASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gm16202-201ENSMUST00000117532 544 ntBASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gm2756-201ENSMUST00000195851 400 ntBASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 AC151286.1-201ENSMUST00000198489 145 ntBASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gm10371-202ENSMUST00000228010 1081 ntBASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav15-1-dv6-1Q5R1D2 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms