Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.69□□□□□ -0.38
Pfdn6Q03958 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn6Q03958 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.69□□□□□ -0.38
Pfdn6Q03958 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.69□□□□□ -0.38
Pfdn6Q03958 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pfdn6Q03958 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn6Q03958 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.68□□□□□ -0.38
Pfdn6Q03958 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.68□□□□□ -0.38
Pfdn6Q03958 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn6Q03958 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn6Q03958 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn6Q03958 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn6Q03958 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.68□□□□□ -0.38
Pfdn6Q03958 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Pfdn6Q03958 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.68□□□□□ -0.38
Pfdn6Q03958 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn6Q03958 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.68□□□□□ -0.38
Pfdn6Q03958 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.68□□□□□ -0.38
Pfdn6Q03958 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.68□□□□□ -0.38
Pfdn6Q03958 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.68□□□□□ -0.38
Pfdn6Q03958 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn6Q03958 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn6Q03958 Gm6091-201ENSMUST00000098307 165 ntBASIC12.68□□□□□ -0.38
Pfdn6Q03958 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn6Q03958 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.68□□□□□ -0.38
Pfdn6Q03958 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn6Q03958 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.68□□□□□ -0.38
Pfdn6Q03958 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn6Q03958 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn6Q03958 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.68□□□□□ -0.38
Pfdn6Q03958 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn6Q03958 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn6Q03958 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn6Q03958 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn6Q03958 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pfdn6Q03958 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn6Q03958 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pfdn6Q03958 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn6Q03958 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Pfdn6Q03958 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Pfdn6Q03958 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn6Q03958 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.67□□□□□ -0.38
Pfdn6Q03958 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn6Q03958 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn6Q03958 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn6Q03958 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Pfdn6Q03958 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.67□□□□□ -0.38
Pfdn6Q03958 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn6Q03958 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn6Q03958 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.67□□□□□ -0.38
Pfdn6Q03958 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.67□□□□□ -0.38
Pfdn6Q03958 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn6Q03958 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Pfdn6Q03958 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn6Q03958 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pfdn6Q03958 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.67□□□□□ -0.38
Pfdn6Q03958 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn6Q03958 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.67□□□□□ -0.38
Pfdn6Q03958 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn6Q03958 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn6Q03958 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn6Q03958 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn6Q03958 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn6Q03958 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pfdn6Q03958 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pfdn6Q03958 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pfdn6Q03958 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pfdn6Q03958 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms