Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm29543-201ENSMUST00000188138 967 ntBASIC8.3□□□□□ -1.08
PrkdcP97313 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC8.3□□□□□ -1.08
PrkdcP97313 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC8.3□□□□□ -1.08
PrkdcP97313 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 Gm12626-201ENSMUST00000117339 1983 ntBASIC8.3□□□□□ -1.08
PrkdcP97313 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
PrkdcP97313 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
PrkdcP97313 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 Gm43677-201ENSMUST00000198098 2378 ntBASIC8.3□□□□□ -1.08
PrkdcP97313 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
PrkdcP97313 Gm22344-201ENSMUST00000122642 278 ntBASIC8.3□□□□□ -1.08
PrkdcP97313 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC8.3□□□□□ -1.08
PrkdcP97313 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC8.3□□□□□ -1.08
PrkdcP97313 Mir6953-201ENSMUST00000184745 68 ntBASIC8.3□□□□□ -1.08
PrkdcP97313 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
PrkdcP97313 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC8.3□□□□□ -1.08
PrkdcP97313 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
PrkdcP97313 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 Smok4a-201ENSMUST00000074512 1455 ntBASIC8.3□□□□□ -1.08
PrkdcP97313 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 Gm21358-201ENSMUST00000191645 1659 ntBASIC8.3□□□□□ -1.08
PrkdcP97313 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC8.3□□□□□ -1.08
PrkdcP97313 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
PrkdcP97313 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 Gm24279-201ENSMUST00000104236 131 ntBASIC8.3□□□□□ -1.08
PrkdcP97313 Gm13624-201ENSMUST00000120263 462 ntBASIC8.3□□□□□ -1.08
PrkdcP97313 Gm37452-201ENSMUST00000194416 1160 ntBASIC8.3□□□□□ -1.08
PrkdcP97313 Gm37826-201ENSMUST00000195329 322 ntBASIC8.3□□□□□ -1.08
PrkdcP97313 Gm17825-201ENSMUST00000206836 794 ntBASIC8.3□□□□□ -1.08
PrkdcP97313 Gm9644-201ENSMUST00000212828 1183 ntBASIC8.3□□□□□ -1.08
PrkdcP97313 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
PrkdcP97313 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PrkdcP97313 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC8.29□□□□□ -1.08
PrkdcP97313 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PrkdcP97313 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC8.29□□□□□ -1.08
PrkdcP97313 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC8.29□□□□□ -1.08
PrkdcP97313 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PrkdcP97313 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
PrkdcP97313 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
PrkdcP97313 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
PrkdcP97313 Gm11660-201ENSMUST00000120955 412 ntBASIC8.29□□□□□ -1.08
PrkdcP97313 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
PrkdcP97313 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PrkdcP97313 Gm27675-201ENSMUST00000184527 94 ntBASIC8.29□□□□□ -1.08
PrkdcP97313 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PrkdcP97313 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC8.29□□□□□ -1.08
PrkdcP97313 Gm37207-201ENSMUST00000194284 296 ntBASIC8.29□□□□□ -1.08
PrkdcP97313 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC8.29□□□□□ -1.08
PrkdcP97313 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PrkdcP97313 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PrkdcP97313 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
PrkdcP97313 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PrkdcP97313 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC8.29□□□□□ -1.08
PrkdcP97313 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PrkdcP97313 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PrkdcP97313 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PrkdcP97313 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PrkdcP97313 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PrkdcP97313 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
PrkdcP97313 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC8.29□□□□□ -1.08
PrkdcP97313 Gm11736-201ENSMUST00000121468 505 ntBASIC8.29□□□□□ -1.08
PrkdcP97313 Gm26174-201ENSMUST00000158415 219 ntBASIC8.29□□□□□ -1.08
PrkdcP97313 Gm43163-201ENSMUST00000196571 442 ntBASIC8.29□□□□□ -1.08
PrkdcP97313 Gm7939-201ENSMUST00000201233 1050 ntBASIC8.29□□□□□ -1.08
PrkdcP97313 BC080696-201ENSMUST00000202858 1218 ntBASIC8.29□□□□□ -1.08
PrkdcP97313 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PrkdcP97313 Gm36970-201ENSMUST00000193688 1859 ntBASIC8.29□□□□□ -1.08
PrkdcP97313 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
PrkdcP97313 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PrkdcP97313 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
PrkdcP97313 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
PrkdcP97313 Gm14005-210ENSMUST00000225087 1413 ntBASIC8.29□□□□□ -1.08
PrkdcP97313 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PrkdcP97313 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PrkdcP97313 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PrkdcP97313 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PrkdcP97313 Gm27826-201ENSMUST00000175282 255 ntBASIC8.29□□□□□ -1.08
PrkdcP97313 Gm5267-201ENSMUST00000191574 1045 ntBASIC8.29□□□□□ -1.08
PrkdcP97313 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC8.29□□□□□ -1.08
PrkdcP97313 Gm42655-201ENSMUST00000202782 1134 ntBASIC8.29□□□□□ -1.08
PrkdcP97313 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC8.29□□□□□ -1.08
PrkdcP97313 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PrkdcP97313 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PrkdcP97313 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms