Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.01□□□□□ -0.33
Smad1P70340 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.01□□□□□ -0.33
Smad1P70340 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Smad1P70340 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Smad1P70340 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.01□□□□□ -0.33
Smad1P70340 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Smad1P70340 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.01□□□□□ -0.33
Smad1P70340 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.01□□□□□ -0.33
Smad1P70340 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Smad1P70340 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Smad1P70340 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.01□□□□□ -0.33
Smad1P70340 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.01□□□□□ -0.33
Smad1P70340 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.01□□□□□ -0.33
Smad1P70340 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.01□□□□□ -0.33
Smad1P70340 Gm26461-201ENSMUST00000175064 290 ntBASIC13.01□□□□□ -0.33
Smad1P70340 Gm43118-201ENSMUST00000199149 775 ntBASIC13.01□□□□□ -0.33
Smad1P70340 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.01□□□□□ -0.33
Smad1P70340 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.01□□□□□ -0.33
Smad1P70340 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Gm24526-201ENSMUST00000082921 158 ntBASIC13.01□□□□□ -0.33
Smad1P70340 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.01□□□□□ -0.33
Smad1P70340 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Smad1P70340 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Smad1P70340 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.01□□□□□ -0.33
Smad1P70340 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smad1P70340 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Smad1P70340 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Smad1P70340 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13□□□□□ -0.33
Smad1P70340 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smad1P70340 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smad1P70340 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smad1P70340 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smad1P70340 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smad1P70340 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Smad1P70340 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smad1P70340 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13□□□□□ -0.33
Smad1P70340 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smad1P70340 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smad1P70340 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smad1P70340 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Smad1P70340 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smad1P70340 Gm22018-201ENSMUST00000104357 131 ntBASIC13□□□□□ -0.33
Smad1P70340 Gm1335-201ENSMUST00000121653 386 ntBASIC13□□□□□ -0.33
Smad1P70340 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smad1P70340 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13□□□□□ -0.33
Smad1P70340 Gm37008-201ENSMUST00000195712 319 ntBASIC13□□□□□ -0.33
Smad1P70340 Gm42627-201ENSMUST00000197347 224 ntBASIC13□□□□□ -0.33
Smad1P70340 Gm44364-201ENSMUST00000198368 141 ntBASIC13□□□□□ -0.33
Smad1P70340 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smad1P70340 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13□□□□□ -0.33
Smad1P70340 Gm44069-201ENSMUST00000204898 506 ntBASIC13□□□□□ -0.33
Smad1P70340 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smad1P70340 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smad1P70340 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smad1P70340 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smad1P70340 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Smad1P70340 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
Smad1P70340 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Smad1P70340 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Smad1P70340 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smad1P70340 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smad1P70340 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Smad1P70340 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Smad1P70340 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smad1P70340 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smad1P70340 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smad1P70340 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smad1P70340 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smad1P70340 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smad1P70340 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smad1P70340 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.99□□□□□ -0.33
Smad1P70340 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smad1P70340 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Smad1P70340 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smad1P70340 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms