Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 Gm18916-201ENSMUST00000198264 1246 ntBASIC8.98□□□□□ -0.97
Rpl39P62892 Gm5279-201ENSMUST00000199575 745 ntBASIC8.98□□□□□ -0.97
Rpl39P62892 Gm6458-201ENSMUST00000211573 635 ntBASIC8.98□□□□□ -0.97
Rpl39P62892 Gm9063-201ENSMUST00000223299 582 ntBASIC8.98□□□□□ -0.97
Rpl39P62892 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 Gm43858-201ENSMUST00000199418 1778 ntBASIC8.98□□□□□ -0.97
Rpl39P62892 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Rpl39P62892 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Rpl39P62892 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Rpl39P62892 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 Gm18630-201ENSMUST00000222109 1397 ntBASIC8.98□□□□□ -0.97
Rpl39P62892 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 Gm9755-201ENSMUST00000032981 1356 ntBASIC8.98□□□□□ -0.97
Rpl39P62892 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rpl39P62892 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
Rpl39P62892 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Rpl39P62892 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Rpl39P62892 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC8.97□□□□□ -0.97
Rpl39P62892 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Rpl39P62892 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC8.97□□□□□ -0.97
Rpl39P62892 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
Rpl39P62892 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC8.97□□□□□ -0.97
Rpl39P62892 Gm44771-201ENSMUST00000206975 626 ntBASIC8.97□□□□□ -0.97
Rpl39P62892 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC8.97□□□□□ -0.97
Rpl39P62892 AC124732.2-201ENSMUST00000221977 316 ntBASIC8.97□□□□□ -0.97
Rpl39P62892 AC238811.1-201ENSMUST00000225302 441 ntBASIC8.97□□□□□ -0.97
Rpl39P62892 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Rpl39P62892 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Rpl39P62892 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Rpl39P62892 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Rpl39P62892 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC8.97□□□□□ -0.97
Rpl39P62892 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Rpl39P62892 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC8.97□□□□□ -0.97
Rpl39P62892 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rpl39P62892 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC8.97□□□□□ -0.97
Rpl39P62892 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Rpl39P62892 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rpl39P62892 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rpl39P62892 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rpl39P62892 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rpl39P62892 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rpl39P62892 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rpl39P62892 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rpl39P62892 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Rpl39P62892 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Rpl39P62892 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rpl39P62892 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Rpl39P62892 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rpl39P62892 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC8.96□□□□□ -0.98
Rpl39P62892 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rpl39P62892 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Rpl39P62892 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms