Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.14□□□□□ -0.63
Sec61a1P61620 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.14□□□□□ -0.63
Sec61a1P61620 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Sec61a1P61620 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a1P61620 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a1P61620 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.13□□□□□ -0.63
Sec61a1P61620 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a1P61620 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.13□□□□□ -0.63
Sec61a1P61620 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a1P61620 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a1P61620 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.13□□□□□ -0.63
Sec61a1P61620 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Sec61a1P61620 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a1P61620 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Sec61a1P61620 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a1P61620 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a1P61620 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a1P61620 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.13□□□□□ -0.63
Sec61a1P61620 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a1P61620 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a1P61620 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a1P61620 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.13□□□□□ -0.63
Sec61a1P61620 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Sec61a1P61620 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a1P61620 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a1P61620 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a1P61620 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a1P61620 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.13□□□□□ -0.63
Sec61a1P61620 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.13□□□□□ -0.63
Sec61a1P61620 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.13□□□□□ -0.63
Sec61a1P61620 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.13□□□□□ -0.63
Sec61a1P61620 Gm12403-201ENSMUST00000121384 959 ntBASIC11.13□□□□□ -0.63
Sec61a1P61620 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.13□□□□□ -0.63
Sec61a1P61620 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.13□□□□□ -0.63
Sec61a1P61620 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.13□□□□□ -0.63
Sec61a1P61620 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.13□□□□□ -0.63
Sec61a1P61620 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.13□□□□□ -0.63
Sec61a1P61620 Gm27486-201ENSMUST00000184923 80 ntBASIC11.13□□□□□ -0.63
Sec61a1P61620 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.13□□□□□ -0.63
Sec61a1P61620 Gm43438-201ENSMUST00000198133 379 ntBASIC11.13□□□□□ -0.63
Sec61a1P61620 Gm38671-201ENSMUST00000200573 130 ntBASIC11.13□□□□□ -0.63
Sec61a1P61620 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.13□□□□□ -0.63
Sec61a1P61620 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a1P61620 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a1P61620 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.13□□□□□ -0.63
Sec61a1P61620 Gm17330-201ENSMUST00000221047 165 ntBASIC11.13□□□□□ -0.63
Sec61a1P61620 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.13□□□□□ -0.63
Sec61a1P61620 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Sec61a1P61620 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a1P61620 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.13□□□□□ -0.63
Sec61a1P61620 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a1P61620 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a1P61620 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a1P61620 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Sec61a1P61620 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a1P61620 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a1P61620 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a1P61620 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Sec61a1P61620 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a1P61620 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sec61a1P61620 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.12□□□□□ -0.63
Sec61a1P61620 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.12□□□□□ -0.63
Sec61a1P61620 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Sec61a1P61620 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Sec61a1P61620 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.12□□□□□ -0.63
Sec61a1P61620 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Sec61a1P61620 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.12□□□□□ -0.63
Sec61a1P61620 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.12□□□□□ -0.63
Sec61a1P61620 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.12□□□□□ -0.63
Sec61a1P61620 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Sec61a1P61620 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Gm12390-201ENSMUST00000117897 397 ntBASIC11.12□□□□□ -0.63
Sec61a1P61620 Gm11425-201ENSMUST00000119608 498 ntBASIC11.12□□□□□ -0.63
Sec61a1P61620 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sec61a1P61620 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.12□□□□□ -0.63
Sec61a1P61620 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms