Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Abcd3P55096 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.29□□□□□ -0.6
Abcd3P55096 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abcd3P55096 Gm43818-201ENSMUST00000200605 466 ntBASIC11.29□□□□□ -0.6
Abcd3P55096 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Abcd3P55096 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abcd3P55096 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.29□□□□□ -0.6
Abcd3P55096 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Abcd3P55096 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abcd3P55096 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abcd3P55096 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Abcd3P55096 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abcd3P55096 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.29□□□□□ -0.6
Abcd3P55096 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abcd3P55096 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Abcd3P55096 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.29□□□□□ -0.6
Abcd3P55096 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abcd3P55096 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Abcd3P55096 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abcd3P55096 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abcd3P55096 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abcd3P55096 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abcd3P55096 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abcd3P55096 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abcd3P55096 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.28□□□□□ -0.6
Abcd3P55096 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.28□□□□□ -0.6
Abcd3P55096 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Abcd3P55096 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.28□□□□□ -0.6
Abcd3P55096 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Abcd3P55096 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abcd3P55096 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abcd3P55096 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abcd3P55096 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abcd3P55096 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
Abcd3P55096 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abcd3P55096 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abcd3P55096 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Abcd3P55096 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Abcd3P55096 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abcd3P55096 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abcd3P55096 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Abcd3P55096 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.28□□□□□ -0.6
Abcd3P55096 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.28□□□□□ -0.6
Abcd3P55096 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.28□□□□□ -0.6
Abcd3P55096 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.28□□□□□ -0.6
Abcd3P55096 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.28□□□□□ -0.6
Abcd3P55096 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.28□□□□□ -0.6
Abcd3P55096 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.28□□□□□ -0.6
Abcd3P55096 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Abcd3P55096 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.28□□□□□ -0.6
Abcd3P55096 Gm19184-201ENSMUST00000196798 928 ntBASIC11.28□□□□□ -0.6
Abcd3P55096 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.28□□□□□ -0.6
Abcd3P55096 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.28□□□□□ -0.6
Abcd3P55096 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abcd3P55096 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abcd3P55096 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abcd3P55096 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.28□□□□□ -0.6
Abcd3P55096 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.28□□□□□ -0.6
Abcd3P55096 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Abcd3P55096 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Abcd3P55096 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.28□□□□□ -0.6
Abcd3P55096 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Abcd3P55096 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abcd3P55096 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.28□□□□□ -0.6
Abcd3P55096 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abcd3P55096 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abcd3P55096 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abcd3P55096 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abcd3P55096 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abcd3P55096 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Abcd3P55096 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.27□□□□□ -0.6
Abcd3P55096 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Abcd3P55096 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Abcd3P55096 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.27□□□□□ -0.6
Abcd3P55096 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Abcd3P55096 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.27□□□□□ -0.6
Abcd3P55096 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Abcd3P55096 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Abcd3P55096 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Abcd3P55096 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Abcd3P55096 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Abcd3P55096 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Abcd3P55096 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Abcd3P55096 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Abcd3P55096 Gm13829-201ENSMUST00000119600 138 ntBASIC11.27□□□□□ -0.61
Abcd3P55096 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Abcd3P55096 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Abcd3P55096 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Abcd3P55096 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Abcd3P55096 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Abcd3P55096 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Abcd3P55096 Gm17150-201ENSMUST00000165577 381 ntBASIC11.27□□□□□ -0.61
Abcd3P55096 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Abcd3P55096 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Abcd3P55096 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Abcd3P55096 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Abcd3P55096 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Abcd3P55096 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.27□□□□□ -0.61
Abcd3P55096 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Abcd3P55096 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms