Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh6P54276 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Msh6P54276 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Msh6P54276 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Msh6P54276 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC15.88■□□□□ 0.13
Msh6P54276 Gm9230-201ENSMUST00000188228 532 ntBASIC15.88■□□□□ 0.13
Msh6P54276 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC15.88■□□□□ 0.13
Msh6P54276 Gm10179-201ENSMUST00000086233 688 ntBASIC15.88■□□□□ 0.13
Msh6P54276 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Msh6P54276 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Msh6P54276 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Msh6P54276 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.88■□□□□ 0.13
Msh6P54276 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Msh6P54276 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Msh6P54276 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Msh6P54276 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Msh6P54276 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Msh6P54276 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Msh6P54276 Gm44999-201ENSMUST00000207456 1493 ntBASIC15.88■□□□□ 0.13
Msh6P54276 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Msh6P54276 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Msh6P54276 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Msh6P54276 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Msh6P54276 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Msh6P54276 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.88■□□□□ 0.13
Msh6P54276 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Msh6P54276 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Msh6P54276 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC15.87■□□□□ 0.13
Msh6P54276 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Msh6P54276 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Msh6P54276 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Msh6P54276 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Msh6P54276 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Msh6P54276 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Msh6P54276 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Msh6P54276 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Msh6P54276 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Msh6P54276 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Msh6P54276 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Msh6P54276 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Msh6P54276 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.87■□□□□ 0.13
Msh6P54276 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Msh6P54276 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Msh6P54276 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Msh6P54276 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Msh6P54276 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Msh6P54276 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Msh6P54276 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Msh6P54276 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.87■□□□□ 0.13
Msh6P54276 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Msh6P54276 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Msh6P54276 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Msh6P54276 Gm13035-201ENSMUST00000117496 342 ntBASIC15.87■□□□□ 0.13
Msh6P54276 Gm11941-201ENSMUST00000119904 610 ntBASIC15.87■□□□□ 0.13
Msh6P54276 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC15.87■□□□□ 0.13
Msh6P54276 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC15.87■□□□□ 0.13
Msh6P54276 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Msh6P54276 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC15.87■□□□□ 0.13
Msh6P54276 Gm19459-201ENSMUST00000176240 835 ntBASIC15.87■□□□□ 0.13
Msh6P54276 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC15.87■□□□□ 0.13
Msh6P54276 AC154849.4-201ENSMUST00000224868 365 ntBASIC15.87■□□□□ 0.13
Msh6P54276 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Msh6P54276 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Msh6P54276 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Msh6P54276 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Msh6P54276 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Msh6P54276 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Msh6P54276 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC15.86■□□□□ 0.13
Msh6P54276 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Msh6P54276 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Msh6P54276 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Msh6P54276 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Msh6P54276 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Msh6P54276 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Msh6P54276 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Msh6P54276 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Msh6P54276 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Msh6P54276 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC15.86■□□□□ 0.13
Msh6P54276 Gm14665-201ENSMUST00000122294 557 ntBASIC15.86■□□□□ 0.13
Msh6P54276 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Msh6P54276 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Msh6P54276 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC15.86■□□□□ 0.13
Msh6P54276 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC15.86■□□□□ 0.13
Msh6P54276 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Msh6P54276 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Msh6P54276 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC15.86■□□□□ 0.13
Msh6P54276 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Msh6P54276 Gm5732-201ENSMUST00000182596 1007 ntBASIC15.86■□□□□ 0.13
Msh6P54276 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC15.86■□□□□ 0.13
Msh6P54276 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC15.86■□□□□ 0.13
Msh6P54276 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Msh6P54276 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Msh6P54276 AC154262.2-202ENSMUST00000225158 1331 ntBASIC15.86■□□□□ 0.13
Msh6P54276 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Msh6P54276 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Msh6P54276 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Msh6P54276 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Msh6P54276 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Msh6P54276 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Msh6P54276 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms