Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdx1P52946 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdx1P52946 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Pdx1P52946 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Pdx1P52946 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdx1P52946 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
Pdx1P52946 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Pdx1P52946 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pdx1P52946 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.46□□□□□ -0.41
Pdx1P52946 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdx1P52946 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdx1P52946 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdx1P52946 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.46□□□□□ -0.41
Pdx1P52946 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdx1P52946 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pdx1P52946 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.46□□□□□ -0.41
Pdx1P52946 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pdx1P52946 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pdx1P52946 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.46□□□□□ -0.41
Pdx1P52946 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdx1P52946 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdx1P52946 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdx1P52946 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pdx1P52946 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdx1P52946 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pdx1P52946 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pdx1P52946 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pdx1P52946 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pdx1P52946 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pdx1P52946 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pdx1P52946 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.46□□□□□ -0.42
Pdx1P52946 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Pdx1P52946 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.42
Pdx1P52946 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pdx1P52946 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Pdx1P52946 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Pdx1P52946 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Pdx1P52946 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Pdx1P52946 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pdx1P52946 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.45□□□□□ -0.42
Pdx1P52946 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdx1P52946 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdx1P52946 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdx1P52946 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdx1P52946 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdx1P52946 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdx1P52946 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdx1P52946 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdx1P52946 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdx1P52946 Gm11793-201ENSMUST00000120433 981 ntBASIC12.45□□□□□ -0.42
Pdx1P52946 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.45□□□□□ -0.42
Pdx1P52946 Gm11597-201ENSMUST00000121423 964 ntBASIC12.45□□□□□ -0.42
Pdx1P52946 Gm14760-201ENSMUST00000121831 999 ntBASIC12.45□□□□□ -0.42
Pdx1P52946 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.45□□□□□ -0.42
Pdx1P52946 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.45□□□□□ -0.42
Pdx1P52946 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.45□□□□□ -0.42
Pdx1P52946 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdx1P52946 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Pdx1P52946 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.45□□□□□ -0.42
Pdx1P52946 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdx1P52946 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.45□□□□□ -0.42
Pdx1P52946 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdx1P52946 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdx1P52946 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pdx1P52946 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pdx1P52946 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdx1P52946 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pdx1P52946 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdx1P52946 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pdx1P52946 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdx1P52946 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pdx1P52946 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdx1P52946 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdx1P52946 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdx1P52946 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdx1P52946 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdx1P52946 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pdx1P52946 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdx1P52946 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.45□□□□□ -0.42
Pdx1P52946 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdx1P52946 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pdx1P52946 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdx1P52946 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.45□□□□□ -0.42
Pdx1P52946 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdx1P52946 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdx1P52946 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdx1P52946 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdx1P52946 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.44□□□□□ -0.42
Pdx1P52946 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdx1P52946 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdx1P52946 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.44□□□□□ -0.42
Pdx1P52946 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.44□□□□□ -0.42
Pdx1P52946 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdx1P52946 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.44□□□□□ -0.42
Pdx1P52946 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdx1P52946 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pdx1P52946 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pdx1P52946 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdx1P52946 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pdx1P52946 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms