Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lhx3P50481 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lhx3P50481 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lhx3P50481 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lhx3P50481 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lhx3P50481 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.75□□□□□ -0.37
Lhx3P50481 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Lhx3P50481 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lhx3P50481 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lhx3P50481 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.75□□□□□ -0.37
Lhx3P50481 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.75□□□□□ -0.37
Lhx3P50481 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Lhx3P50481 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.75□□□□□ -0.37
Lhx3P50481 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lhx3P50481 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lhx3P50481 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Lhx3P50481 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lhx3P50481 Gm20482-202ENSMUST00000174729 825 ntBASIC12.75□□□□□ -0.37
Lhx3P50481 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lhx3P50481 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lhx3P50481 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lhx3P50481 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.75□□□□□ -0.37
Lhx3P50481 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lhx3P50481 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lhx3P50481 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.75□□□□□ -0.37
Lhx3P50481 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.75□□□□□ -0.37
Lhx3P50481 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.75□□□□□ -0.37
Lhx3P50481 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lhx3P50481 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lhx3P50481 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lhx3P50481 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Lhx3P50481 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Lhx3P50481 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Lhx3P50481 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lhx3P50481 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lhx3P50481 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Lhx3P50481 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lhx3P50481 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lhx3P50481 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lhx3P50481 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx3P50481 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx3P50481 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx3P50481 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx3P50481 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.74□□□□□ -0.37
Lhx3P50481 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx3P50481 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.74□□□□□ -0.37
Lhx3P50481 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx3P50481 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Lhx3P50481 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx3P50481 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx3P50481 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx3P50481 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx3P50481 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.74□□□□□ -0.37
Lhx3P50481 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx3P50481 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx3P50481 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Lhx3P50481 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Lhx3P50481 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.74□□□□□ -0.37
Lhx3P50481 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx3P50481 Gm15547-201ENSMUST00000122152 333 ntBASIC12.74□□□□□ -0.37
Lhx3P50481 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.74□□□□□ -0.37
Lhx3P50481 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Lhx3P50481 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.74□□□□□ -0.37
Lhx3P50481 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx3P50481 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx3P50481 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.74□□□□□ -0.37
Lhx3P50481 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx3P50481 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx3P50481 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx3P50481 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Lhx3P50481 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx3P50481 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx3P50481 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.74□□□□□ -0.37
Lhx3P50481 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Lhx3P50481 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx3P50481 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx3P50481 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lhx3P50481 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx3P50481 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx3P50481 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx3P50481 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx3P50481 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lhx3P50481 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.74□□□□□ -0.37
Lhx3P50481 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lhx3P50481 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx3P50481 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx3P50481 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx3P50481 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Lhx3P50481 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx3P50481 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Lhx3P50481 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Lhx3P50481 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Lhx3P50481 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Lhx3P50481 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx3P50481 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx3P50481 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx3P50481 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx3P50481 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.73□□□□□ -0.37
Lhx3P50481 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx3P50481 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms