Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Brca1P48754 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC13.89□□□□□ -0.19
Brca1P48754 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC13.89□□□□□ -0.19
Brca1P48754 Gm4862-201ENSMUST00000170405 438 ntBASIC13.89□□□□□ -0.19
Brca1P48754 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
Brca1P48754 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Brca1P48754 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Brca1P48754 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC13.89□□□□□ -0.19
Brca1P48754 Gm3551-201ENSMUST00000190750 664 ntBASIC13.89□□□□□ -0.19
Brca1P48754 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.89□□□□□ -0.19
Brca1P48754 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Brca1P48754 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Brca1P48754 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Brca1P48754 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Brca1P48754 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Brca1P48754 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Brca1P48754 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Brca1P48754 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Brca1P48754 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Brca1P48754 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Brca1P48754 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Brca1P48754 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Brca1P48754 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brca1P48754 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Brca1P48754 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brca1P48754 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brca1P48754 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Brca1P48754 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Brca1P48754 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Brca1P48754 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brca1P48754 Mir671-201ENSMUST00000102432 98 ntBASIC13.88□□□□□ -0.19
Brca1P48754 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Brca1P48754 Gm11980-201ENSMUST00000121445 986 ntBASIC13.88□□□□□ -0.19
Brca1P48754 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC13.88□□□□□ -0.19
Brca1P48754 Gm38117-201ENSMUST00000194653 939 ntBASIC13.88□□□□□ -0.19
Brca1P48754 Gm45575-201ENSMUST00000210283 548 ntBASIC13.88□□□□□ -0.19
Brca1P48754 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC13.88□□□□□ -0.19
Brca1P48754 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Brca1P48754 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Brca1P48754 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.88□□□□□ -0.19
Brca1P48754 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Brca1P48754 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Brca1P48754 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Brca1P48754 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Brca1P48754 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.88□□□□□ -0.19
Brca1P48754 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Brca1P48754 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brca1P48754 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brca1P48754 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brca1P48754 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brca1P48754 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brca1P48754 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.88□□□□□ -0.19
Brca1P48754 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Brca1P48754 Gm12419-201ENSMUST00000116649 636 ntBASIC13.87□□□□□ -0.19
Brca1P48754 Gm11956-201ENSMUST00000119525 512 ntBASIC13.87□□□□□ -0.19
Brca1P48754 n-R5s84-201ENSMUST00000122591 109 ntBASIC13.87□□□□□ -0.19
Brca1P48754 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.87□□□□□ -0.19
Brca1P48754 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brca1P48754 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC13.87□□□□□ -0.19
Brca1P48754 Mt1-202ENSMUST00000211807 1085 ntBASIC13.87□□□□□ -0.19
Brca1P48754 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.87□□□□□ -0.19
Brca1P48754 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.87□□□□□ -0.19
Brca1P48754 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.87□□□□□ -0.19
Brca1P48754 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brca1P48754 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brca1P48754 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brca1P48754 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Brca1P48754 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brca1P48754 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Brca1P48754 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brca1P48754 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.87□□□□□ -0.19
Brca1P48754 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Brca1P48754 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Brca1P48754 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Brca1P48754 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Brca1P48754 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brca1P48754 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brca1P48754 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.87□□□□□ -0.19
Brca1P48754 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.87□□□□□ -0.19
Brca1P48754 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Brca1P48754 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brca1P48754 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brca1P48754 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brca1P48754 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brca1P48754 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brca1P48754 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Brca1P48754 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brca1P48754 Gm25076-201ENSMUST00000104098 132 ntBASIC13.87□□□□□ -0.19
Brca1P48754 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Brca1P48754 Gm14585-201ENSMUST00000120713 634 ntBASIC13.87□□□□□ -0.19
Brca1P48754 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Brca1P48754 Gm4310-201ENSMUST00000177847 889 ntBASIC13.87□□□□□ -0.19
Brca1P48754 Gm27910-201ENSMUST00000185004 107 ntBASIC13.87□□□□□ -0.19
Brca1P48754 Gm29499-201ENSMUST00000189151 486 ntBASIC13.87□□□□□ -0.19
Brca1P48754 Gm28329-201ENSMUST00000191208 689 ntBASIC13.87□□□□□ -0.19
Brca1P48754 Gm29171-201ENSMUST00000191397 486 ntBASIC13.87□□□□□ -0.19
Brca1P48754 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.87□□□□□ -0.19
Brca1P48754 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Brca1P48754 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC13.87□□□□□ -0.19
Brca1P48754 CT025553.1-201ENSMUST00000226292 299 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms