Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4bP46467 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4bP46467 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4bP46467 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4bP46467 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4bP46467 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4bP46467 Gm11803-201ENSMUST00000119966 444 ntBASIC12.81□□□□□ -0.36
Vps4bP46467 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.81□□□□□ -0.36
Vps4bP46467 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Vps4bP46467 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4bP46467 Gm8810-201ENSMUST00000172895 754 ntBASIC12.81□□□□□ -0.36
Vps4bP46467 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Vps4bP46467 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Vps4bP46467 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4bP46467 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Vps4bP46467 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.81□□□□□ -0.36
Vps4bP46467 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4bP46467 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4bP46467 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4bP46467 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Vps4bP46467 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Vps4bP46467 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4bP46467 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.81□□□□□ -0.36
Vps4bP46467 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4bP46467 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4bP46467 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4bP46467 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.81□□□□□ -0.36
Vps4bP46467 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.81□□□□□ -0.36
Vps4bP46467 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4bP46467 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4bP46467 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4bP46467 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4bP46467 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4bP46467 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4bP46467 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4bP46467 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4bP46467 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4bP46467 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4bP46467 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4bP46467 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4bP46467 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4bP46467 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.8□□□□□ -0.36
Vps4bP46467 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4bP46467 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.8□□□□□ -0.36
Vps4bP46467 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.8□□□□□ -0.36
Vps4bP46467 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.8□□□□□ -0.36
Vps4bP46467 Gm19184-201ENSMUST00000196798 928 ntBASIC12.8□□□□□ -0.36
Vps4bP46467 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.8□□□□□ -0.36
Vps4bP46467 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4bP46467 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Vps4bP46467 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4bP46467 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4bP46467 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4bP46467 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.8□□□□□ -0.36
Vps4bP46467 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.8□□□□□ -0.36
Vps4bP46467 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4bP46467 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Vps4bP46467 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4bP46467 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.8□□□□□ -0.36
Vps4bP46467 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4bP46467 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4bP46467 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4bP46467 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.8□□□□□ -0.36
Vps4bP46467 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4bP46467 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4bP46467 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4bP46467 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4bP46467 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4bP46467 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4bP46467 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4bP46467 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4bP46467 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4bP46467 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4bP46467 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4bP46467 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4bP46467 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4bP46467 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4bP46467 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4bP46467 Gm12203-201ENSMUST00000118235 598 ntBASIC12.79□□□□□ -0.36
Vps4bP46467 Gm12209-201ENSMUST00000120089 596 ntBASIC12.79□□□□□ -0.36
Vps4bP46467 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4bP46467 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4bP46467 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4bP46467 Gm6244-201ENSMUST00000178732 841 ntBASIC12.79□□□□□ -0.36
Vps4bP46467 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4bP46467 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4bP46467 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
Vps4bP46467 Gm10012-201ENSMUST00000078252 192 ntBASIC12.79□□□□□ -0.36
Vps4bP46467 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4bP46467 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4bP46467 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.79□□□□□ -0.36
Vps4bP46467 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vps4bP46467 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4bP46467 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4bP46467 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4bP46467 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.79□□□□□ -0.36
Vps4bP46467 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4bP46467 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4bP46467 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4bP46467 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms