Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.16□□□□□ -0.46
Tnfsf4P43488 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Gm26185-201ENSMUST00000157692 266 ntBASIC12.16□□□□□ -0.46
Tnfsf4P43488 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.16□□□□□ -0.46
Tnfsf4P43488 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.16□□□□□ -0.46
Tnfsf4P43488 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Gm10576-201ENSMUST00000191927 825 ntBASIC12.16□□□□□ -0.46
Tnfsf4P43488 Gm37042-201ENSMUST00000193816 581 ntBASIC12.16□□□□□ -0.46
Tnfsf4P43488 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.16□□□□□ -0.46
Tnfsf4P43488 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.16□□□□□ -0.46
Tnfsf4P43488 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.16□□□□□ -0.46
Tnfsf4P43488 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Tnfsf4P43488 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.16□□□□□ -0.46
Tnfsf4P43488 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfsf4P43488 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfsf4P43488 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfsf4P43488 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Tnfsf4P43488 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfsf4P43488 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfsf4P43488 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfsf4P43488 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfsf4P43488 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.15□□□□□ -0.46
Tnfsf4P43488 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfsf4P43488 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfsf4P43488 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.15□□□□□ -0.46
Tnfsf4P43488 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfsf4P43488 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfsf4P43488 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfsf4P43488 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Tnfsf4P43488 Gm2231-201ENSMUST00000125661 612 ntBASIC12.15□□□□□ -0.46
Tnfsf4P43488 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfsf4P43488 Gm12091-201ENSMUST00000146791 830 ntBASIC12.15□□□□□ -0.46
Tnfsf4P43488 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfsf4P43488 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.15□□□□□ -0.46
Tnfsf4P43488 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfsf4P43488 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.15□□□□□ -0.46
Tnfsf4P43488 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Tnfsf4P43488 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfsf4P43488 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfsf4P43488 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfsf4P43488 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfsf4P43488 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.15□□□□□ -0.46
Tnfsf4P43488 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfsf4P43488 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfsf4P43488 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfsf4P43488 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfsf4P43488 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfsf4P43488 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfsf4P43488 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfsf4P43488 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.15□□□□□ -0.47
Tnfsf4P43488 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tnfsf4P43488 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tnfsf4P43488 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Tnfsf4P43488 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf4P43488 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf4P43488 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tnfsf4P43488 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Tnfsf4P43488 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms