Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HttP42859 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13□□□□□ -0.33
HttP42859 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13□□□□□ -0.33
HttP42859 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HttP42859 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
HttP42859 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC13□□□□□ -0.33
HttP42859 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC13□□□□□ -0.33
HttP42859 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC13□□□□□ -0.33
HttP42859 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC13□□□□□ -0.33
HttP42859 AC187103.3-201ENSMUST00000225725 646 ntBASIC13□□□□□ -0.33
HttP42859 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13□□□□□ -0.33
HttP42859 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HttP42859 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13□□□□□ -0.33
HttP42859 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13□□□□□ -0.33
HttP42859 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
HttP42859 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HttP42859 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HttP42859 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13□□□□□ -0.33
HttP42859 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HttP42859 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13□□□□□ -0.33
HttP42859 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HttP42859 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC13□□□□□ -0.33
HttP42859 AC129975.1-201ENSMUST00000224816 592 ntBASIC13□□□□□ -0.33
HttP42859 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HttP42859 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
HttP42859 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HttP42859 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13□□□□□ -0.33
HttP42859 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
HttP42859 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
HttP42859 Gm11244-201ENSMUST00000121243 237 ntBASIC12.99□□□□□ -0.33
HttP42859 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.99□□□□□ -0.33
HttP42859 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
HttP42859 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
HttP42859 Gm28833-201ENSMUST00000189671 559 ntBASIC12.99□□□□□ -0.33
HttP42859 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.99□□□□□ -0.33
HttP42859 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HttP42859 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.99□□□□□ -0.33
HttP42859 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HttP42859 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
HttP42859 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HttP42859 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HttP42859 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HttP42859 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HttP42859 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HttP42859 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC12.99□□□□□ -0.33
HttP42859 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HttP42859 Mir3060-201ENSMUST00000175339 83 ntBASIC12.99□□□□□ -0.33
HttP42859 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.99□□□□□ -0.33
HttP42859 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
HttP42859 Gm2345-201ENSMUST00000193451 589 ntBASIC12.99□□□□□ -0.33
HttP42859 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HttP42859 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
HttP42859 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
HttP42859 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HttP42859 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HttP42859 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HttP42859 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
HttP42859 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HttP42859 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HttP42859 AC159810.1-201ENSMUST00000214838 1480 ntBASIC12.99□□□□□ -0.33
HttP42859 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HttP42859 Matn2-206ENSMUST00000228570 2798 ntBASIC12.99□□□□□ -0.33
HttP42859 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HttP42859 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HttP42859 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HttP42859 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HttP42859 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HttP42859 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HttP42859 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HttP42859 Gm45094-201ENSMUST00000207013 617 ntBASIC12.99□□□□□ -0.33
HttP42859 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HttP42859 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HttP42859 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HttP42859 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HttP42859 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HttP42859 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
HttP42859 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HttP42859 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HttP42859 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HttP42859 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HttP42859 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
HttP42859 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HttP42859 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
HttP42859 Gm44315-201ENSMUST00000203041 219 ntBASIC12.98□□□□□ -0.33
HttP42859 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
HttP42859 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HttP42859 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
HttP42859 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
HttP42859 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HttP42859 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.98□□□□□ -0.33
HttP42859 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.98□□□□□ -0.33
HttP42859 Gm6641-201ENSMUST00000196100 1315 ntBASIC12.98□□□□□ -0.33
HttP42859 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
HttP42859 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HttP42859 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HttP42859 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
HttP42859 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
HttP42859 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.98□□□□□ -0.33
HttP42859 Gm12986-201ENSMUST00000119037 967 ntBASIC12.98□□□□□ -0.33
HttP42859 Gm13204-201ENSMUST00000120110 821 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms