Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.86□□□□□ -0.51
Sox6P40645 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox6P40645 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox6P40645 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox6P40645 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox6P40645 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox6P40645 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox6P40645 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox6P40645 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox6P40645 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Sox6P40645 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Sox6P40645 Gm13612-201ENSMUST00000119276 390 ntBASIC11.86□□□□□ -0.51
Sox6P40645 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sox6P40645 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.86□□□□□ -0.51
Sox6P40645 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.86□□□□□ -0.51
Sox6P40645 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox6P40645 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox6P40645 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.86□□□□□ -0.51
Sox6P40645 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox6P40645 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox6P40645 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox6P40645 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.86□□□□□ -0.51
Sox6P40645 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.86□□□□□ -0.51
Sox6P40645 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox6P40645 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox6P40645 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox6P40645 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox6P40645 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox6P40645 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.86□□□□□ -0.51
Sox6P40645 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox6P40645 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox6P40645 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox6P40645 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sox6P40645 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sox6P40645 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox6P40645 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox6P40645 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox6P40645 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Sox6P40645 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox6P40645 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox6P40645 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox6P40645 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox6P40645 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Sox6P40645 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox6P40645 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox6P40645 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox6P40645 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Sox6P40645 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox6P40645 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox6P40645 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox6P40645 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.85□□□□□ -0.51
Sox6P40645 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.85□□□□□ -0.51
Sox6P40645 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox6P40645 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox6P40645 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.85□□□□□ -0.51
Sox6P40645 Gm5745-201ENSMUST00000183748 313 ntBASIC11.85□□□□□ -0.51
Sox6P40645 Gm27486-201ENSMUST00000184923 80 ntBASIC11.85□□□□□ -0.51
Sox6P40645 Gm45841-201ENSMUST00000207700 164 ntBASIC11.85□□□□□ -0.51
Sox6P40645 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.85□□□□□ -0.51
Sox6P40645 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.85□□□□□ -0.51
Sox6P40645 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.85□□□□□ -0.51
Sox6P40645 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox6P40645 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox6P40645 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox6P40645 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox6P40645 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox6P40645 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox6P40645 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox6P40645 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox6P40645 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox6P40645 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox6P40645 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.85□□□□□ -0.51
Sox6P40645 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.85□□□□□ -0.51
Sox6P40645 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.85□□□□□ -0.51
Sox6P40645 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox6P40645 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.85□□□□□ -0.51
Sox6P40645 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Sox6P40645 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Sox6P40645 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.84□□□□□ -0.51
Sox6P40645 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.84□□□□□ -0.51
Sox6P40645 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.84□□□□□ -0.51
Sox6P40645 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.84□□□□□ -0.51
Sox6P40645 Gm6447-201ENSMUST00000118905 835 ntBASIC11.84□□□□□ -0.51
Sox6P40645 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms