Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a11P31650 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a11P31650 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Slc6a11P31650 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a11P31650 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a11P31650 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a11P31650 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a11P31650 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a11P31650 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a11P31650 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a11P31650 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Slc6a11P31650 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.99□□□□□ -0.49
Slc6a11P31650 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a11P31650 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a11P31650 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.99□□□□□ -0.49
Slc6a11P31650 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Slc6a11P31650 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.99□□□□□ -0.49
Slc6a11P31650 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a11P31650 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a11P31650 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.99□□□□□ -0.49
Slc6a11P31650 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Slc6a11P31650 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a11P31650 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a11P31650 Daam2-202ENSMUST00000224595 1926 ntBASIC11.99□□□□□ -0.49
Slc6a11P31650 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a11P31650 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a11P31650 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.99□□□□□ -0.49
Slc6a11P31650 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a11P31650 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.99□□□□□ -0.49
Slc6a11P31650 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a11P31650 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a11P31650 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Slc6a11P31650 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Slc6a11P31650 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Slc6a11P31650 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Slc6a11P31650 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.98□□□□□ -0.49
Slc6a11P31650 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Slc6a11P31650 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.98□□□□□ -0.49
Slc6a11P31650 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Slc6a11P31650 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 Gm13813-201ENSMUST00000120998 787 ntBASIC11.98□□□□□ -0.49
Slc6a11P31650 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.98□□□□□ -0.49
Slc6a11P31650 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.98□□□□□ -0.49
Slc6a11P31650 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.98□□□□□ -0.49
Slc6a11P31650 Gm6458-201ENSMUST00000211573 635 ntBASIC11.98□□□□□ -0.49
Slc6a11P31650 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Slc6a11P31650 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 Gm10012-201ENSMUST00000078252 192 ntBASIC11.98□□□□□ -0.49
Slc6a11P31650 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
Slc6a11P31650 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Slc6a11P31650 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Slc6a11P31650 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Slc6a11P31650 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a11P31650 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a11P31650 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a11P31650 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.97□□□□□ -0.49
Slc6a11P31650 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.97□□□□□ -0.49
Slc6a11P31650 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.97□□□□□ -0.49
Slc6a11P31650 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a11P31650 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a11P31650 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a11P31650 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a11P31650 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a11P31650 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a11P31650 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a11P31650 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a11P31650 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a11P31650 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a11P31650 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Slc6a11P31650 Gm16202-201ENSMUST00000117532 544 ntBASIC11.97□□□□□ -0.49
Slc6a11P31650 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.97□□□□□ -0.49
Slc6a11P31650 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.97□□□□□ -0.49
Slc6a11P31650 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms