Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Cd40lgP27548 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Cd40lgP27548 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Cd40lgP27548 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cd40lgP27548 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cd40lgP27548 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cd40lgP27548 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Cd40lgP27548 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.68□□□□□ -0.54
Cd40lgP27548 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cd40lgP27548 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cd40lgP27548 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Cd40lgP27548 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cd40lgP27548 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cd40lgP27548 Gm26927-201ENSMUST00000182385 965 ntBASIC11.68□□□□□ -0.54
Cd40lgP27548 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Cd40lgP27548 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.68□□□□□ -0.54
Cd40lgP27548 Gm19163-201ENSMUST00000223313 780 ntBASIC11.68□□□□□ -0.54
Cd40lgP27548 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.68□□□□□ -0.54
Cd40lgP27548 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cd40lgP27548 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.68□□□□□ -0.54
Cd40lgP27548 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cd40lgP27548 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cd40lgP27548 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cd40lgP27548 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cd40lgP27548 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cd40lgP27548 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Cd40lgP27548 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cd40lgP27548 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cd40lgP27548 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cd40lgP27548 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.67□□□□□ -0.54
Cd40lgP27548 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cd40lgP27548 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cd40lgP27548 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cd40lgP27548 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cd40lgP27548 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cd40lgP27548 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cd40lgP27548 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cd40lgP27548 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cd40lgP27548 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.67□□□□□ -0.54
Cd40lgP27548 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cd40lgP27548 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cd40lgP27548 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cd40lgP27548 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cd40lgP27548 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cd40lgP27548 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cd40lgP27548 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cd40lgP27548 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.67□□□□□ -0.54
Cd40lgP27548 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cd40lgP27548 Mir686-201ENSMUST00000102174 109 ntBASIC11.67□□□□□ -0.54
Cd40lgP27548 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Cd40lgP27548 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cd40lgP27548 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.67□□□□□ -0.54
Cd40lgP27548 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Cd40lgP27548 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.67□□□□□ -0.54
Cd40lgP27548 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.67□□□□□ -0.54
Cd40lgP27548 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cd40lgP27548 Mir1938-201ENSMUST00000158746 100 ntBASIC11.67□□□□□ -0.54
Cd40lgP27548 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cd40lgP27548 Gm17208-201ENSMUST00000168388 535 ntBASIC11.67□□□□□ -0.54
Cd40lgP27548 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.67□□□□□ -0.54
Cd40lgP27548 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cd40lgP27548 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cd40lgP27548 Gm27682-201ENSMUST00000183930 110 ntBASIC11.67□□□□□ -0.54
Cd40lgP27548 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.67□□□□□ -0.54
Cd40lgP27548 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cd40lgP27548 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.67□□□□□ -0.54
Cd40lgP27548 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.67□□□□□ -0.54
Cd40lgP27548 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cd40lgP27548 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Cd40lgP27548 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Cd40lgP27548 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cd40lgP27548 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cd40lgP27548 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.67□□□□□ -0.54
Cd40lgP27548 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cd40lgP27548 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cd40lgP27548 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Cd40lgP27548 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cd40lgP27548 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cd40lgP27548 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cd40lgP27548 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cd40lgP27548 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cd40lgP27548 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cd40lgP27548 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cd40lgP27548 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.66□□□□□ -0.54
Cd40lgP27548 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd40lgP27548 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cd40lgP27548 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd40lgP27548 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.66□□□□□ -0.54
Cd40lgP27548 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cd40lgP27548 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd40lgP27548 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Cd40lgP27548 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd40lgP27548 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd40lgP27548 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd40lgP27548 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.66□□□□□ -0.54
Cd40lgP27548 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.66□□□□□ -0.54
Cd40lgP27548 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd40lgP27548 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.66□□□□□ -0.54
Cd40lgP27548 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cd40lgP27548 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms