Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.12□□□□□ -0.47
Msx1P13297 Gm12001-201ENSMUST00000121727 913 ntBASIC12.12□□□□□ -0.47
Msx1P13297 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Msx1P13297 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Msx1P13297 Gm7809-201ENSMUST00000153199 742 ntBASIC12.12□□□□□ -0.47
Msx1P13297 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.12□□□□□ -0.47
Msx1P13297 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.12□□□□□ -0.47
Msx1P13297 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Msx1P13297 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.12□□□□□ -0.47
Msx1P13297 AC153899.1-201ENSMUST00000214092 1117 ntBASIC12.12□□□□□ -0.47
Msx1P13297 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC12.12□□□□□ -0.47
Msx1P13297 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.12□□□□□ -0.47
Msx1P13297 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Msx1P13297 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Msx1P13297 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Msx1P13297 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Msx1P13297 Krtap9-1-201ENSMUST00000093936 1044 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Msx1P13297 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Msx1P13297 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.12□□□□□ -0.47
Msx1P13297 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Msx1P13297 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Msx1P13297 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Msx1P13297 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.12□□□□□ -0.47
Msx1P13297 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.12□□□□□ -0.47
Msx1P13297 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Msx1P13297 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Msx1P13297 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Msx1P13297 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Msx1P13297 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Msx1P13297 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Msx1P13297 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Msx1P13297 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Msx1P13297 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.12□□□□□ -0.47
Msx1P13297 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.12□□□□□ -0.47
Msx1P13297 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Msx1P13297 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx1P13297 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.11□□□□□ -0.47
Msx1P13297 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Msx1P13297 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx1P13297 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Msx1P13297 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.11□□□□□ -0.47
Msx1P13297 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Msx1P13297 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx1P13297 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx1P13297 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx1P13297 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx1P13297 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx1P13297 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Msx1P13297 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Msx1P13297 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx1P13297 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx1P13297 Gm37863-201ENSMUST00000194911 1457 ntBASIC12.11□□□□□ -0.47
Msx1P13297 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx1P13297 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx1P13297 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.11□□□□□ -0.47
Msx1P13297 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Msx1P13297 Gm11964-201ENSMUST00000120982 444 ntBASIC12.11□□□□□ -0.47
Msx1P13297 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.11□□□□□ -0.47
Msx1P13297 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Msx1P13297 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.11□□□□□ -0.47
Msx1P13297 Gm18660-201ENSMUST00000199542 629 ntBASIC12.11□□□□□ -0.47
Msx1P13297 Gm43124-201ENSMUST00000201878 278 ntBASIC12.11□□□□□ -0.47
Msx1P13297 Gm44069-201ENSMUST00000204898 506 ntBASIC12.11□□□□□ -0.47
Msx1P13297 Gm45151-201ENSMUST00000205445 712 ntTSL 2 BASIC12.11□□□□□ -0.47
Msx1P13297 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.11□□□□□ -0.47
Msx1P13297 AC153968.2-201ENSMUST00000215579 1140 ntBASIC12.11□□□□□ -0.47
Msx1P13297 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.11□□□□□ -0.47
Msx1P13297 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Msx1P13297 AC132433.1-201ENSMUST00000221553 1101 ntBASIC12.11□□□□□ -0.47
Msx1P13297 CT010480.1-201ENSMUST00000223612 363 ntBASIC12.11□□□□□ -0.47
Msx1P13297 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx1P13297 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Msx1P13297 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx1P13297 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Msx1P13297 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx1P13297 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx1P13297 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx1P13297 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Msx1P13297 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx1P13297 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx1P13297 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Msx1P13297 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Msx1P13297 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx1P13297 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.11□□□□□ -0.47
Msx1P13297 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Msx1P13297 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx1P13297 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx1P13297 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx1P13297 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Msx1P13297 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.1□□□□□ -0.47
Msx1P13297 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Msx1P13297 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Msx1P13297 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Msx1P13297 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Msx1P13297 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Msx1P13297 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms