Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
CfdP03953 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CfdP03953 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CfdP03953 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CfdP03953 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CfdP03953 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CfdP03953 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CfdP03953 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CfdP03953 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC10.53□□□□□ -0.72
CfdP03953 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CfdP03953 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CfdP03953 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.53□□□□□ -0.72
CfdP03953 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
CfdP03953 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CfdP03953 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CfdP03953 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.53□□□□□ -0.72
CfdP03953 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
CfdP03953 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
CfdP03953 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
CfdP03953 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.52□□□□□ -0.72
CfdP03953 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
CfdP03953 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
CfdP03953 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
CfdP03953 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
CfdP03953 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
CfdP03953 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CfdP03953 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CfdP03953 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CfdP03953 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CfdP03953 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
CfdP03953 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CfdP03953 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.52□□□□□ -0.73
CfdP03953 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CfdP03953 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CfdP03953 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CfdP03953 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC10.52□□□□□ -0.73
CfdP03953 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC10.52□□□□□ -0.73
CfdP03953 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CfdP03953 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC10.52□□□□□ -0.73
CfdP03953 Gm38223-201ENSMUST00000194484 695 ntBASIC10.52□□□□□ -0.73
CfdP03953 Gm6458-201ENSMUST00000211573 635 ntBASIC10.52□□□□□ -0.73
CfdP03953 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.52□□□□□ -0.73
CfdP03953 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.52□□□□□ -0.73
CfdP03953 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CfdP03953 AC126408.1-201ENSMUST00000225184 523 ntBASIC10.52□□□□□ -0.73
CfdP03953 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.52□□□□□ -0.73
CfdP03953 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CfdP03953 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC10.52□□□□□ -0.73
CfdP03953 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CfdP03953 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CfdP03953 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.52□□□□□ -0.73
CfdP03953 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CfdP03953 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CfdP03953 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CfdP03953 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
CfdP03953 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
CfdP03953 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.52□□□□□ -0.73
CfdP03953 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CfdP03953 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CfdP03953 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CfdP03953 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CfdP03953 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
CfdP03953 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.52□□□□□ -0.73
CfdP03953 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CfdP03953 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.52□□□□□ -0.73
CfdP03953 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.52□□□□□ -0.73
CfdP03953 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.51□□□□□ -0.73
CfdP03953 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
CfdP03953 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.51□□□□□ -0.73
CfdP03953 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
CfdP03953 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.51□□□□□ -0.73
CfdP03953 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.51□□□□□ -0.73
CfdP03953 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.51□□□□□ -0.73
CfdP03953 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
CfdP03953 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC10.51□□□□□ -0.73
CfdP03953 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC10.51□□□□□ -0.73
CfdP03953 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Gm13453-201ENSMUST00000118708 357 ntBASIC10.51□□□□□ -0.73
CfdP03953 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CfdP03953 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC10.51□□□□□ -0.73
CfdP03953 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC10.51□□□□□ -0.73
CfdP03953 Gm27430-201ENSMUST00000184585 107 ntBASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms