Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopeO89079 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.99□□□□□ -0.33
CopeO89079 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopeO89079 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopeO89079 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopeO89079 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CopeO89079 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopeO89079 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopeO89079 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopeO89079 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CopeO89079 Gm11618-201ENSMUST00000117946 267 ntBASIC12.99□□□□□ -0.33
CopeO89079 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
CopeO89079 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.99□□□□□ -0.33
CopeO89079 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CopeO89079 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopeO89079 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.99□□□□□ -0.33
CopeO89079 Gm7063-201ENSMUST00000186840 981 ntBASIC12.99□□□□□ -0.33
CopeO89079 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.99□□□□□ -0.33
CopeO89079 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.99□□□□□ -0.33
CopeO89079 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CopeO89079 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CopeO89079 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.99□□□□□ -0.33
CopeO89079 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.99□□□□□ -0.33
CopeO89079 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopeO89079 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopeO89079 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CopeO89079 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.99□□□□□ -0.33
CopeO89079 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopeO89079 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopeO89079 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopeO89079 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CopeO89079 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopeO89079 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopeO89079 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopeO89079 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CopeO89079 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopeO89079 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.99□□□□□ -0.33
CopeO89079 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopeO89079 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CopeO89079 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopeO89079 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.98□□□□□ -0.33
CopeO89079 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopeO89079 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
CopeO89079 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.98□□□□□ -0.33
CopeO89079 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CopeO89079 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopeO89079 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopeO89079 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopeO89079 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CopeO89079 Cog3-203ENSMUST00000227473 4197 ntBASIC12.98□□□□□ -0.33
CopeO89079 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopeO89079 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.98□□□□□ -0.33
CopeO89079 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CopeO89079 Gm14057-201ENSMUST00000120631 482 ntBASIC12.98□□□□□ -0.33
CopeO89079 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.98□□□□□ -0.33
CopeO89079 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.98□□□□□ -0.33
CopeO89079 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.98□□□□□ -0.33
CopeO89079 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CopeO89079 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.98□□□□□ -0.33
CopeO89079 Mir6392-201ENSMUST00000184924 108 ntBASIC12.98□□□□□ -0.33
CopeO89079 Gm44855-201ENSMUST00000205725 362 ntBASIC12.98□□□□□ -0.33
CopeO89079 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.98□□□□□ -0.33
CopeO89079 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.98□□□□□ -0.33
CopeO89079 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopeO89079 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.98□□□□□ -0.33
CopeO89079 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.98□□□□□ -0.33
CopeO89079 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.98□□□□□ -0.33
CopeO89079 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CopeO89079 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CopeO89079 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CopeO89079 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopeO89079 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.98□□□□□ -0.33
CopeO89079 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopeO89079 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.98□□□□□ -0.33
CopeO89079 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopeO89079 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CopeO89079 Rubie-203ENSMUST00000227803 2430 ntBASIC12.98□□□□□ -0.33
CopeO89079 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopeO89079 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.98□□□□□ -0.33
CopeO89079 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CopeO89079 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CopeO89079 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CopeO89079 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CopeO89079 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CopeO89079 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CopeO89079 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CopeO89079 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
CopeO89079 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CopeO89079 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CopeO89079 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CopeO89079 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CopeO89079 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CopeO89079 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CopeO89079 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
CopeO89079 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.97□□□□□ -0.33
CopeO89079 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CopeO89079 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.97□□□□□ -0.33
CopeO89079 Gm23363-201ENSMUST00000175024 79 ntBASIC12.97□□□□□ -0.33
CopeO89079 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.97□□□□□ -0.33
CopeO89079 Gm37917-201ENSMUST00000194711 392 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms