Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.27□□□□□ -0.6
CcnkO88874 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CcnkO88874 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CcnkO88874 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CcnkO88874 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CcnkO88874 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
CcnkO88874 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CcnkO88874 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CcnkO88874 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcnkO88874 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcnkO88874 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcnkO88874 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcnkO88874 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcnkO88874 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.27□□□□□ -0.61
CcnkO88874 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcnkO88874 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
CcnkO88874 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
CcnkO88874 Gm12341-201ENSMUST00000119724 503 ntBASIC11.27□□□□□ -0.61
CcnkO88874 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
CcnkO88874 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.27□□□□□ -0.61
CcnkO88874 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CcnkO88874 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CcnkO88874 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CcnkO88874 Mir7221-201ENSMUST00000184009 72 ntBASIC11.27□□□□□ -0.61
CcnkO88874 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CcnkO88874 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.27□□□□□ -0.61
CcnkO88874 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CcnkO88874 Gm18307-201ENSMUST00000206864 949 ntBASIC11.27□□□□□ -0.61
CcnkO88874 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.27□□□□□ -0.61
CcnkO88874 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcnkO88874 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcnkO88874 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CcnkO88874 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcnkO88874 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.27□□□□□ -0.61
CcnkO88874 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.27□□□□□ -0.61
CcnkO88874 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
CcnkO88874 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcnkO88874 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CcnkO88874 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CcnkO88874 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CcnkO88874 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcnkO88874 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CcnkO88874 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcnkO88874 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcnkO88874 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcnkO88874 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
CcnkO88874 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcnkO88874 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CcnkO88874 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
CcnkO88874 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
CcnkO88874 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.26□□□□□ -0.61
CcnkO88874 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.26□□□□□ -0.61
CcnkO88874 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.26□□□□□ -0.61
CcnkO88874 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.26□□□□□ -0.61
CcnkO88874 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.26□□□□□ -0.61
CcnkO88874 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
CcnkO88874 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.26□□□□□ -0.61
CcnkO88874 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.26□□□□□ -0.61
CcnkO88874 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.26□□□□□ -0.61
CcnkO88874 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.26□□□□□ -0.61
CcnkO88874 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.26□□□□□ -0.61
CcnkO88874 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.26□□□□□ -0.61
CcnkO88874 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.26□□□□□ -0.61
CcnkO88874 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.26□□□□□ -0.61
CcnkO88874 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.26□□□□□ -0.61
CcnkO88874 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
CcnkO88874 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
CcnkO88874 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CcnkO88874 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms