Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.39□□□□□ -0.43
ClppO88696 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
ClppO88696 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClppO88696 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ClppO88696 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClppO88696 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
ClppO88696 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.38□□□□□ -0.43
ClppO88696 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.38□□□□□ -0.43
ClppO88696 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
ClppO88696 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
ClppO88696 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
ClppO88696 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
ClppO88696 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
ClppO88696 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
ClppO88696 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.38□□□□□ -0.43
ClppO88696 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.38□□□□□ -0.43
ClppO88696 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.38□□□□□ -0.43
ClppO88696 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.38□□□□□ -0.43
ClppO88696 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.38□□□□□ -0.43
ClppO88696 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
ClppO88696 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
ClppO88696 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Mospd4-201ENSMUST00000180618 576 ntBASIC12.38□□□□□ -0.43
ClppO88696 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.38□□□□□ -0.43
ClppO88696 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.38□□□□□ -0.43
ClppO88696 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.38□□□□□ -0.43
ClppO88696 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.38□□□□□ -0.43
ClppO88696 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.38□□□□□ -0.43
ClppO88696 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.38□□□□□ -0.43
ClppO88696 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
ClppO88696 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
ClppO88696 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.38□□□□□ -0.43
ClppO88696 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
ClppO88696 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
ClppO88696 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClppO88696 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClppO88696 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClppO88696 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.37□□□□□ -0.43
ClppO88696 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.37□□□□□ -0.43
ClppO88696 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClppO88696 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ClppO88696 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.37□□□□□ -0.43
ClppO88696 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ClppO88696 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClppO88696 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClppO88696 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClppO88696 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClppO88696 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ClppO88696 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
ClppO88696 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClppO88696 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
ClppO88696 Gm13297-201ENSMUST00000120205 934 ntBASIC12.37□□□□□ -0.43
ClppO88696 Gm13350-201ENSMUST00000120519 479 ntBASIC12.37□□□□□ -0.43
ClppO88696 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.37□□□□□ -0.43
ClppO88696 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.37□□□□□ -0.43
ClppO88696 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.37□□□□□ -0.43
ClppO88696 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClppO88696 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.37□□□□□ -0.43
ClppO88696 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClppO88696 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.37□□□□□ -0.43
ClppO88696 Gm27516-201ENSMUST00000184237 98 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms