Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.72□□□□□ -0.53
BckdkO55028 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.72□□□□□ -0.53
BckdkO55028 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.72□□□□□ -0.53
BckdkO55028 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.72□□□□□ -0.53
BckdkO55028 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.72□□□□□ -0.53
BckdkO55028 Gm26185-201ENSMUST00000157692 266 ntBASIC11.72□□□□□ -0.53
BckdkO55028 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
BckdkO55028 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.72□□□□□ -0.53
BckdkO55028 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.72□□□□□ -0.53
BckdkO55028 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.72□□□□□ -0.53
BckdkO55028 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.72□□□□□ -0.53
BckdkO55028 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
BckdkO55028 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
BckdkO55028 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.72□□□□□ -0.53
BckdkO55028 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.72□□□□□ -0.53
BckdkO55028 Gm43133-201ENSMUST00000197472 463 ntBASIC11.72□□□□□ -0.53
BckdkO55028 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.72□□□□□ -0.53
BckdkO55028 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.72□□□□□ -0.53
BckdkO55028 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.72□□□□□ -0.53
BckdkO55028 Gm9823-201ENSMUST00000051212 327 ntBASIC11.72□□□□□ -0.53
BckdkO55028 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
BckdkO55028 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.72□□□□□ -0.53
BckdkO55028 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
BckdkO55028 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.72□□□□□ -0.53
BckdkO55028 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.72□□□□□ -0.53
BckdkO55028 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.72□□□□□ -0.53
BckdkO55028 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
BckdkO55028 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
BckdkO55028 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
BckdkO55028 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BckdkO55028 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BckdkO55028 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BckdkO55028 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
BckdkO55028 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
BckdkO55028 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.53
BckdkO55028 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.71□□□□□ -0.53
BckdkO55028 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.71□□□□□ -0.53
BckdkO55028 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
BckdkO55028 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BckdkO55028 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
BckdkO55028 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
BckdkO55028 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BckdkO55028 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BckdkO55028 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BckdkO55028 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
BckdkO55028 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BckdkO55028 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BckdkO55028 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
BckdkO55028 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BckdkO55028 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
BckdkO55028 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BckdkO55028 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
BckdkO55028 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.71□□□□□ -0.53
BckdkO55028 Gm43118-201ENSMUST00000199149 775 ntBASIC11.71□□□□□ -0.53
BckdkO55028 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.71□□□□□ -0.53
BckdkO55028 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
BckdkO55028 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.71□□□□□ -0.53
BckdkO55028 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BckdkO55028 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.71□□□□□ -0.53
BckdkO55028 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BckdkO55028 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
BckdkO55028 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BckdkO55028 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
BckdkO55028 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
BckdkO55028 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
BckdkO55028 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
BckdkO55028 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
BckdkO55028 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
BckdkO55028 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
BckdkO55028 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
BckdkO55028 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
BckdkO55028 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
BckdkO55028 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
BckdkO55028 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.71□□□□□ -0.54
BckdkO55028 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.71□□□□□ -0.54
BckdkO55028 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
BckdkO55028 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.7□□□□□ -0.54
BckdkO55028 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BckdkO55028 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
BckdkO55028 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.7□□□□□ -0.54
BckdkO55028 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
BckdkO55028 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BckdkO55028 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BckdkO55028 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BckdkO55028 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
BckdkO55028 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.7□□□□□ -0.54
BckdkO55028 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
BckdkO55028 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms