Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf13O54965 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Rnf13O54965 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf13O54965 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.42□□□□□ -0.58
Rnf13O54965 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf13O54965 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.42□□□□□ -0.58
Rnf13O54965 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.42□□□□□ -0.58
Rnf13O54965 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf13O54965 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf13O54965 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf13O54965 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.42□□□□□ -0.58
Rnf13O54965 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.42□□□□□ -0.58
Rnf13O54965 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf13O54965 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf13O54965 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf13O54965 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf13O54965 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf13O54965 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.42□□□□□ -0.58
Rnf13O54965 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.42□□□□□ -0.58
Rnf13O54965 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Rnf13O54965 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.42□□□□□ -0.58
Rnf13O54965 Gm28693-202ENSMUST00000190758 331 ntBASIC11.42□□□□□ -0.58
Rnf13O54965 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.42□□□□□ -0.58
Rnf13O54965 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.42□□□□□ -0.58
Rnf13O54965 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf13O54965 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.42□□□□□ -0.58
Rnf13O54965 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf13O54965 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf13O54965 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf13O54965 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf13O54965 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf13O54965 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf13O54965 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf13O54965 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf13O54965 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf13O54965 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Rnf13O54965 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rnf13O54965 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf13O54965 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf13O54965 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf13O54965 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf13O54965 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf13O54965 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf13O54965 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf13O54965 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf13O54965 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf13O54965 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf13O54965 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.41□□□□□ -0.58
Rnf13O54965 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Rnf13O54965 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf13O54965 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf13O54965 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf13O54965 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Rnf13O54965 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf13O54965 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf13O54965 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf13O54965 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf13O54965 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.41□□□□□ -0.58
Rnf13O54965 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf13O54965 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf13O54965 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf13O54965 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf13O54965 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf13O54965 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf13O54965 Gm6152-201ENSMUST00000151704 340 ntBASIC11.41□□□□□ -0.58
Rnf13O54965 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf13O54965 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.41□□□□□ -0.58
Rnf13O54965 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Rnf13O54965 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Rnf13O54965 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf13O54965 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf13O54965 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf13O54965 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.41□□□□□ -0.58
Rnf13O54965 Mir6392-201ENSMUST00000184924 108 ntBASIC11.41□□□□□ -0.58
Rnf13O54965 Mir7654-201ENSMUST00000185082 70 ntBASIC11.41□□□□□ -0.58
Rnf13O54965 Gm37917-201ENSMUST00000194711 392 ntBASIC11.41□□□□□ -0.58
Rnf13O54965 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.41□□□□□ -0.58
Rnf13O54965 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf13O54965 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf13O54965 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Rnf13O54965 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf13O54965 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf13O54965 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf13O54965 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf13O54965 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf13O54965 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf13O54965 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Rnf13O54965 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf13O54965 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Rnf13O54965 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf13O54965 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Rnf13O54965 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf13O54965 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf13O54965 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf13O54965 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf13O54965 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf13O54965 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf13O54965 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Rnf13O54965 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Rnf13O54965 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms