Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc188F6WEU2 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Ccdc188F6WEU2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc188F6WEU2 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc188F6WEU2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.65□□□□□ -0.38
Ccdc188F6WEU2 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ccdc188F6WEU2 AC137950.2-202ENSMUST00000227150 1635 ntBASIC12.65□□□□□ -0.38
Ccdc188F6WEU2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc188F6WEU2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc188F6WEU2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc188F6WEU2 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc188F6WEU2 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc188F6WEU2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Ccdc188F6WEU2 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc188F6WEU2 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Ccdc188F6WEU2 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ccdc188F6WEU2 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Gm3329-201ENSMUST00000159873 556 ntBASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Gm9797-202ENSMUST00000218003 294 ntBASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Gm4930-201ENSMUST00000219926 1087 ntBASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc188F6WEU2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 Gm11783-201ENSMUST00000119549 885 ntBASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 Gm45310-201ENSMUST00000210436 275 ntBASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 Gm38344-201ENSMUST00000195306 1353 ntBASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc188F6WEU2 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms