Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Gm11803-201ENSMUST00000119966 444 ntBASIC13.83□□□□□ -0.2
Trim30cD3YVI9 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim30cD3YVI9 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.83□□□□□ -0.2
Trim30cD3YVI9 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trim30cD3YVI9 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim30cD3YVI9 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim30cD3YVI9 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim30cD3YVI9 Gm7561-201ENSMUST00000211203 886 ntBASIC13.83□□□□□ -0.2
Trim30cD3YVI9 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim30cD3YVI9 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim30cD3YVI9 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trim30cD3YVI9 Gm25857-201ENSMUST00000082788 129 ntBASIC13.83□□□□□ -0.2
Trim30cD3YVI9 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim30cD3YVI9 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trim30cD3YVI9 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trim30cD3YVI9 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim30cD3YVI9 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim30cD3YVI9 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim30cD3YVI9 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim30cD3YVI9 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim30cD3YVI9 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim30cD3YVI9 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim30cD3YVI9 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Gm10156-201ENSMUST00000122364 462 ntBASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.82□□□□□ -0.2
Trim30cD3YVI9 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Gm10652-201ENSMUST00000199790 2622 ntBASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim30cD3YVI9 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Gm8213-201ENSMUST00000118191 441 ntBASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Gm25116-201ENSMUST00000157191 122 ntBASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Gm8810-201ENSMUST00000172895 754 ntBASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim30cD3YVI9 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms