Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm2128-201ENSMUST00000108009 2560 ntBASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm43860-201ENSMUST00000201742 2705 ntBASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm5053-201ENSMUST00000208361 1678 ntBASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm7063-201ENSMUST00000186840 981 ntBASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm38144-201ENSMUST00000192790 465 ntBASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm17330-201ENSMUST00000221047 165 ntBASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm5161-201ENSMUST00000075243 853 ntBASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm24447-201ENSMUST00000083977 338 ntBASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav6n-6A0A075B6B2 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms