Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Gm23200-201ENSMUST00000104379 132 ntBASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Gm5419-201ENSMUST00000119301 527 ntBASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Gm27341-201ENSMUST00000183570 106 ntBASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Gm19187-201ENSMUST00000206781 892 ntBASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Gm12997-201ENSMUST00000120207 640 ntBASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Gm5070-201ENSMUST00000177599 862 ntBASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Scn8aQ9WTU3 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Gm14028-201ENSMUST00000117434 479 ntBASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Gm11930-201ENSMUST00000117788 190 ntBASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Gm13296-201ENSMUST00000117854 997 ntBASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.61□□□□□ -0.39
Scn8aQ9WTU3 Mir6927-201ENSMUST00000184494 71 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms