Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SrfQ9JM73 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SrfQ9JM73 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SrfQ9JM73 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.98□□□□□ -0.49
SrfQ9JM73 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SrfQ9JM73 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SrfQ9JM73 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SrfQ9JM73 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SrfQ9JM73 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SrfQ9JM73 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SrfQ9JM73 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.98□□□□□ -0.49
SrfQ9JM73 Gm18829-201ENSMUST00000188150 1622 ntBASIC11.98□□□□□ -0.49
SrfQ9JM73 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SrfQ9JM73 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SrfQ9JM73 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SrfQ9JM73 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SrfQ9JM73 Gm44975-201ENSMUST00000207435 1390 ntBASIC11.98□□□□□ -0.49
SrfQ9JM73 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SrfQ9JM73 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.98□□□□□ -0.49
SrfQ9JM73 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SrfQ9JM73 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
SrfQ9JM73 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SrfQ9JM73 Gm13255-201ENSMUST00000117255 547 ntBASIC11.98□□□□□ -0.49
SrfQ9JM73 Gm15131-201ENSMUST00000119124 595 ntBASIC11.98□□□□□ -0.49
SrfQ9JM73 Gm15782-201ENSMUST00000121073 445 ntBASIC11.98□□□□□ -0.49
SrfQ9JM73 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC11.98□□□□□ -0.49
SrfQ9JM73 Gm23699-201ENSMUST00000158835 135 ntBASIC11.98□□□□□ -0.49
SrfQ9JM73 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.98□□□□□ -0.49
SrfQ9JM73 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.98□□□□□ -0.49
SrfQ9JM73 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.98□□□□□ -0.49
SrfQ9JM73 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.98□□□□□ -0.49
SrfQ9JM73 Mir7032-201ENSMUST00000185154 79 ntBASIC11.98□□□□□ -0.49
SrfQ9JM73 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.98□□□□□ -0.49
SrfQ9JM73 Gm28439-201ENSMUST00000187714 876 ntBASIC11.98□□□□□ -0.49
SrfQ9JM73 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.98□□□□□ -0.49
SrfQ9JM73 Gm14005-208ENSMUST00000223654 681 ntBASIC11.98□□□□□ -0.49
SrfQ9JM73 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.98□□□□□ -0.49
SrfQ9JM73 Hprt-201ENSMUST00000026723 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SrfQ9JM73 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SrfQ9JM73 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SrfQ9JM73 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SrfQ9JM73 Gm9996-201ENSMUST00000070359 913 ntBASIC11.98□□□□□ -0.49
SrfQ9JM73 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
SrfQ9JM73 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SrfQ9JM73 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SrfQ9JM73 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SrfQ9JM73 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SrfQ9JM73 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SrfQ9JM73 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
SrfQ9JM73 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SrfQ9JM73 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SrfQ9JM73 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SrfQ9JM73 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SrfQ9JM73 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SrfQ9JM73 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SrfQ9JM73 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
SrfQ9JM73 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
SrfQ9JM73 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SrfQ9JM73 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SrfQ9JM73 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SrfQ9JM73 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SrfQ9JM73 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SrfQ9JM73 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SrfQ9JM73 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SrfQ9JM73 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
SrfQ9JM73 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SrfQ9JM73 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SrfQ9JM73 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SrfQ9JM73 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.97□□□□□ -0.49
SrfQ9JM73 Gm38262-201ENSMUST00000194760 1382 ntBASIC11.97□□□□□ -0.49
SrfQ9JM73 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SrfQ9JM73 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SrfQ9JM73 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SrfQ9JM73 Gm22133-201ENSMUST00000102082 109 ntBASIC11.97□□□□□ -0.49
SrfQ9JM73 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
SrfQ9JM73 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.97□□□□□ -0.49
SrfQ9JM73 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SrfQ9JM73 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.97□□□□□ -0.49
SrfQ9JM73 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.97□□□□□ -0.49
SrfQ9JM73 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SrfQ9JM73 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.97□□□□□ -0.49
SrfQ9JM73 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.97□□□□□ -0.49
SrfQ9JM73 2810404M03Rik-201ENSMUST00000188324 1245 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SrfQ9JM73 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.97□□□□□ -0.49
SrfQ9JM73 Gm8190-201ENSMUST00000199603 586 ntBASIC11.97□□□□□ -0.49
SrfQ9JM73 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC11.97□□□□□ -0.49
SrfQ9JM73 Gm19189-201ENSMUST00000221689 754 ntBASIC11.97□□□□□ -0.49
SrfQ9JM73 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC11.97□□□□□ -0.49
SrfQ9JM73 AC162940.1-201ENSMUST00000224745 1167 ntBASIC11.97□□□□□ -0.49
SrfQ9JM73 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SrfQ9JM73 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SrfQ9JM73 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SrfQ9JM73 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SrfQ9JM73 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
SrfQ9JM73 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SrfQ9JM73 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
SrfQ9JM73 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SrfQ9JM73 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
SrfQ9JM73 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SrfQ9JM73 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms