Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a2Q9JLR1 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a2Q9JLR1 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sec61a2Q9JLR1 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a2Q9JLR1 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a2Q9JLR1 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a2Q9JLR1 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a2Q9JLR1 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.41□□□□□ -0.58
Sec61a2Q9JLR1 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61a2Q9JLR1 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 Gm8213-201ENSMUST00000118191 441 ntBASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 Gm27331-201ENSMUST00000183705 60 ntBASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 Gm37922-201ENSMUST00000195596 455 ntBASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61a2Q9JLR1 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sec61a2Q9JLR1 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Sec61a2Q9JLR1 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.4□□□□□ -0.59
Sec61a2Q9JLR1 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Sec61a2Q9JLR1 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sec61a2Q9JLR1 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.4□□□□□ -0.59
Sec61a2Q9JLR1 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Gm26185-201ENSMUST00000157692 266 ntBASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Gm29649-201ENSMUST00000185649 419 ntBASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Gm29705-201ENSMUST00000212598 474 ntBASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61a2Q9JLR1 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Sec61a2Q9JLR1 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a2Q9JLR1 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.38□□□□□ -0.59
Sec61a2Q9JLR1 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61a2Q9JLR1 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.38□□□□□ -0.59
Sec61a2Q9JLR1 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.38□□□□□ -0.59
Sec61a2Q9JLR1 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms