Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Stag1Q9D3E6 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Stag1Q9D3E6 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC15.06■□□□□ 0
Stag1Q9D3E6 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC15.06■□□□□ 0
Stag1Q9D3E6 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Stag1Q9D3E6 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Stag1Q9D3E6 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC15.06■□□□□ 0
Stag1Q9D3E6 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC15.06■□□□□ 0
Stag1Q9D3E6 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Stag1Q9D3E6 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Stag1Q9D3E6 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.06■□□□□ 0
Stag1Q9D3E6 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Stag1Q9D3E6 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC15.06■□□□□ 0
Stag1Q9D3E6 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Stag1Q9D3E6 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC15.06■□□□□ 0
Stag1Q9D3E6 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Stag1Q9D3E6 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.05■□□□□ 0
Stag1Q9D3E6 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Stag1Q9D3E6 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ 0
Stag1Q9D3E6 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC15.05■□□□□ 0
Stag1Q9D3E6 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Stag1Q9D3E6 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Stag1Q9D3E6 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Stag1Q9D3E6 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Stag1Q9D3E6 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Stag1Q9D3E6 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC15.05■□□□□ -0
Stag1Q9D3E6 Gm15703-201ENSMUST00000120250 880 ntBASIC15.05■□□□□ -0
Stag1Q9D3E6 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC15.05■□□□□ -0
Stag1Q9D3E6 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC15.05■□□□□ -0
Stag1Q9D3E6 Rprl1-202ENSMUST00000198476 238 ntBASIC15.05■□□□□ -0
Stag1Q9D3E6 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Stag1Q9D3E6 Gm45224-201ENSMUST00000208203 414 ntBASIC15.05■□□□□ -0
Stag1Q9D3E6 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC15.05■□□□□ -0
Stag1Q9D3E6 Gm8385-201ENSMUST00000058999 643 ntBASIC15.05■□□□□ -0
Stag1Q9D3E6 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Stag1Q9D3E6 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Stag1Q9D3E6 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Stag1Q9D3E6 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Stag1Q9D3E6 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Stag1Q9D3E6 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Stag1Q9D3E6 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Stag1Q9D3E6 AC122197.2-201ENSMUST00000219196 1635 ntBASIC15.04■□□□□ -0
Stag1Q9D3E6 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Stag1Q9D3E6 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC15.04■□□□□ -0
Stag1Q9D3E6 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC15.04■□□□□ -0
Stag1Q9D3E6 Gm9333-201ENSMUST00000205452 1323 ntBASIC15.04■□□□□ -0
Stag1Q9D3E6 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC15.04■□□□□ -0
Stag1Q9D3E6 Gm12015-201ENSMUST00000117065 843 ntBASIC15.04■□□□□ -0
Stag1Q9D3E6 Gm13296-201ENSMUST00000117854 997 ntBASIC15.04■□□□□ -0
Stag1Q9D3E6 Gm12314-201ENSMUST00000118104 538 ntBASIC15.04■□□□□ -0
Stag1Q9D3E6 B9d1os-201ENSMUST00000137010 674 ntBASIC15.04■□□□□ -0
Stag1Q9D3E6 Gm6963-201ENSMUST00000147879 379 ntBASIC15.04■□□□□ -0
Stag1Q9D3E6 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC15.04■□□□□ -0
Stag1Q9D3E6 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC15.04■□□□□ -0
Stag1Q9D3E6 Mir6927-201ENSMUST00000184494 71 ntBASIC15.04■□□□□ -0
Stag1Q9D3E6 Gm3786-201ENSMUST00000202659 378 ntBASIC15.04■□□□□ -0
Stag1Q9D3E6 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Stag1Q9D3E6 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Stag1Q9D3E6 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Stag1Q9D3E6 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Stag1Q9D3E6 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Stag1Q9D3E6 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Stag1Q9D3E6 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.04■□□□□ -0
Stag1Q9D3E6 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.04■□□□□ -0
Stag1Q9D3E6 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Stag1Q9D3E6 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Stag1Q9D3E6 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Stag1Q9D3E6 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Stag1Q9D3E6 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Stag1Q9D3E6 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.04■□□□□ -0
Stag1Q9D3E6 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Stag1Q9D3E6 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Stag1Q9D3E6 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Stag1Q9D3E6 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Stag1Q9D3E6 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Stag1Q9D3E6 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Stag1Q9D3E6 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC15.03■□□□□ -0
Stag1Q9D3E6 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.03■□□□□ -0
Stag1Q9D3E6 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC15.03■□□□□ -0
Stag1Q9D3E6 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.03■□□□□ -0
Stag1Q9D3E6 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Stag1Q9D3E6 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Stag1Q9D3E6 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC15.03■□□□□ -0
Stag1Q9D3E6 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.03■□□□□ -0
Stag1Q9D3E6 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Stag1Q9D3E6 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15.03■□□□□ -0
Stag1Q9D3E6 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Stag1Q9D3E6 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC15.03■□□□□ -0
Stag1Q9D3E6 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Stag1Q9D3E6 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC15.03■□□□□ -0
Stag1Q9D3E6 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC15.03■□□□□ -0
Stag1Q9D3E6 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC15.03■□□□□ -0
Stag1Q9D3E6 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC15.03■□□□□ -0
Stag1Q9D3E6 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC15.03■□□□□ -0
Stag1Q9D3E6 AC154305.4-201ENSMUST00000224520 614 ntBASIC15.03■□□□□ -0
Stag1Q9D3E6 Nsd1-205ENSMUST00000224693 852 ntBASIC15.03■□□□□ -0
Stag1Q9D3E6 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.03■□□□□ -0
Stag1Q9D3E6 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Stag1Q9D3E6 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.03■□□□□ -0
Stag1Q9D3E6 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms