Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Snf8Q9CZ28 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Snf8Q9CZ28 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13□□□□□ -0.33
Snf8Q9CZ28 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Snf8Q9CZ28 Gm1995-201ENSMUST00000220838 2602 ntBASIC13□□□□□ -0.33
Snf8Q9CZ28 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Snf8Q9CZ28 Gm44806-201ENSMUST00000205574 2303 ntBASIC13□□□□□ -0.33
Snf8Q9CZ28 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Snf8Q9CZ28 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13□□□□□ -0.33
Snf8Q9CZ28 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13□□□□□ -0.33
Snf8Q9CZ28 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Snf8Q9CZ28 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Snf8Q9CZ28 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Snf8Q9CZ28 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Snf8Q9CZ28 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Snf8Q9CZ28 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snf8Q9CZ28 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snf8Q9CZ28 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snf8Q9CZ28 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Snf8Q9CZ28 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.99□□□□□ -0.33
Snf8Q9CZ28 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.99□□□□□ -0.33
Snf8Q9CZ28 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
Snf8Q9CZ28 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snf8Q9CZ28 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.99□□□□□ -0.33
Snf8Q9CZ28 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snf8Q9CZ28 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snf8Q9CZ28 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snf8Q9CZ28 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snf8Q9CZ28 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Snf8Q9CZ28 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snf8Q9CZ28 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.99□□□□□ -0.33
Snf8Q9CZ28 Gm14760-201ENSMUST00000121831 999 ntBASIC12.99□□□□□ -0.33
Snf8Q9CZ28 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Snf8Q9CZ28 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.99□□□□□ -0.33
Snf8Q9CZ28 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snf8Q9CZ28 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.99□□□□□ -0.33
Snf8Q9CZ28 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.99□□□□□ -0.33
Snf8Q9CZ28 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.99□□□□□ -0.33
Snf8Q9CZ28 Gm18624-201ENSMUST00000220966 658 ntBASIC12.99□□□□□ -0.33
Snf8Q9CZ28 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Snf8Q9CZ28 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snf8Q9CZ28 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snf8Q9CZ28 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Snf8Q9CZ28 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snf8Q9CZ28 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snf8Q9CZ28 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Snf8Q9CZ28 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Snf8Q9CZ28 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snf8Q9CZ28 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Snf8Q9CZ28 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.98□□□□□ -0.33
Snf8Q9CZ28 Gm37917-201ENSMUST00000194711 392 ntBASIC12.98□□□□□ -0.33
Snf8Q9CZ28 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.98□□□□□ -0.33
Snf8Q9CZ28 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Snf8Q9CZ28 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snf8Q9CZ28 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Snf8Q9CZ28 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Snf8Q9CZ28 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Snf8Q9CZ28 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snf8Q9CZ28 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snf8Q9CZ28 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Snf8Q9CZ28 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Snf8Q9CZ28 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Snf8Q9CZ28 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.97□□□□□ -0.33
Snf8Q9CZ28 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Snf8Q9CZ28 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Snf8Q9CZ28 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Snf8Q9CZ28 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.97□□□□□ -0.33
Snf8Q9CZ28 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms