Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Gm45071-201ENSMUST00000205353 571 ntBASIC12.02□□□□□ -0.49
Otud1Q9CUB6 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Otud1Q9CUB6 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Gm10434-201ENSMUST00000101158 471 ntBASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Gm2546-201ENSMUST00000182630 991 ntBASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Gm45925-201ENSMUST00000218882 744 ntBASIC12.01□□□□□ -0.49
Otud1Q9CUB6 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Gm18719-201ENSMUST00000196696 1413 ntBASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Otud1Q9CUB6 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12□□□□□ -0.49
Otud1Q9CUB6 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12□□□□□ -0.49
Otud1Q9CUB6 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Otud1Q9CUB6 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Otud1Q9CUB6 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Otud1Q9CUB6 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Otud1Q9CUB6 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Otud1Q9CUB6 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12□□□□□ -0.49
Otud1Q9CUB6 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Otud1Q9CUB6 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Otud1Q9CUB6 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12□□□□□ -0.49
Otud1Q9CUB6 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Otud1Q9CUB6 Gm25214-201ENSMUST00000104573 129 ntBASIC12□□□□□ -0.49
Otud1Q9CUB6 Gm14921-201ENSMUST00000118643 908 ntBASIC12□□□□□ -0.49
Otud1Q9CUB6 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12□□□□□ -0.49
Otud1Q9CUB6 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms