Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Gm2495-201ENSMUST00000191160 466 ntBASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.9□□□□□ -0.5
Nkd1Q99MH6 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkd1Q99MH6 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.9□□□□□ -0.5
Nkd1Q99MH6 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nkd1Q99MH6 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Gm45668-201ENSMUST00000211271 493 ntBASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.89□□□□□ -0.51
Nkd1Q99MH6 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkd1Q99MH6 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd1Q99MH6 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd1Q99MH6 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd1Q99MH6 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd1Q99MH6 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Nkd1Q99MH6 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd1Q99MH6 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd1Q99MH6 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd1Q99MH6 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd1Q99MH6 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
Nkd1Q99MH6 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Nkd1Q99MH6 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Nkd1Q99MH6 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Nkd1Q99MH6 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.88□□□□□ -0.51
Nkd1Q99MH6 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.88□□□□□ -0.51
Nkd1Q99MH6 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd1Q99MH6 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.88□□□□□ -0.51
Nkd1Q99MH6 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Nkd1Q99MH6 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd1Q99MH6 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd1Q99MH6 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.88□□□□□ -0.51
Nkd1Q99MH6 Gm10576-201ENSMUST00000191927 825 ntBASIC11.88□□□□□ -0.51
Nkd1Q99MH6 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.88□□□□□ -0.51
Nkd1Q99MH6 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.88□□□□□ -0.51
Nkd1Q99MH6 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Nkd1Q99MH6 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Nkd1Q99MH6 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkd1Q99MH6 Mir339-201ENSMUST00000083659 96 ntBASIC11.88□□□□□ -0.51
Nkd1Q99MH6 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Nkd1Q99MH6 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Nkd1Q99MH6 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms