Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Gm23363-201ENSMUST00000175024 79 ntBASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Gm42627-201ENSMUST00000197347 224 ntBASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Gm18584-201ENSMUST00000203098 964 ntBASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Gm5781-201ENSMUST00000219792 443 ntBASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdha3Q91Y16 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Gm38002-201ENSMUST00000193255 180 ntBASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Gm42693-201ENSMUST00000196779 631 ntBASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Gm45880-201ENSMUST00000213041 853 ntBASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Mir339-201ENSMUST00000083659 96 ntBASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdha3Q91Y16 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdha3Q91Y16 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms