Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb1Q91Y08 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Gm15824-201ENSMUST00000119516 955 ntBASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Snora73a-201ENSMUST00000082453 205 ntBASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb1Q91Y08 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Gm13829-201ENSMUST00000119600 138 ntBASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Gm12502-201ENSMUST00000120197 444 ntBASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Rmrp-201ENSMUST00000157463 271 ntBASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Gm6222-202ENSMUST00000182143 629 ntBASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb1Q91Y08 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Pcdhb1Q91Y08 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb1Q91Y08 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhb1Q91Y08 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb1Q91Y08 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb1Q91Y08 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhb1Q91Y08 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb1Q91Y08 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb1Q91Y08 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
Pcdhb1Q91Y08 Gm7809-201ENSMUST00000153199 742 ntBASIC13.1□□□□□ -0.31
Pcdhb1Q91Y08 Gm25261-201ENSMUST00000157416 134 ntBASIC13.1□□□□□ -0.31
Pcdhb1Q91Y08 Gm16379-201ENSMUST00000161469 348 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms