Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Gm20281-201ENSMUST00000188225 267 ntBASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Gm43743-201ENSMUST00000197898 697 ntBASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Gm42796-201ENSMUST00000199913 1087 ntBASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Gm44213-201ENSMUST00000204977 703 ntBASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Gm44716-201ENSMUST00000209007 710 ntBASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Mettl21c-201ENSMUST00000061421 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Gm12097-201ENSMUST00000121523 1414 ntBASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Gm42879-201ENSMUST00000198656 2214 ntBASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdhb20Q91XZ9 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Gm5046-201ENSMUST00000100608 611 ntBASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Gm11425-201ENSMUST00000119608 498 ntBASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Scgb1b25-ps-201ENSMUST00000186419 415 ntBASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 CT025579.2-201ENSMUST00000225280 816 ntBASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Gm9396-201ENSMUST00000076703 567 ntBASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Vmn1r201-201ENSMUST00000091730 903 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
Pcdhb20Q91XZ9 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb20Q91XZ9 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb20Q91XZ9 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdhb20Q91XZ9 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb20Q91XZ9 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb20Q91XZ9 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pcdhb20Q91XZ9 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pcdhb20Q91XZ9 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.75□□□□□ -0.37
Pcdhb20Q91XZ9 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.75□□□□□ -0.37
Pcdhb20Q91XZ9 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Pcdhb20Q91XZ9 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb20Q91XZ9 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC12.75□□□□□ -0.37
Pcdhb20Q91XZ9 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms