Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm11425-201ENSMUST00000119608 498 ntBASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Gm5781-201ENSMUST00000219792 443 ntBASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Gm9396-201ENSMUST00000076703 567 ntBASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Gm11597-201ENSMUST00000121423 964 ntBASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Gm43433-201ENSMUST00000196573 481 ntBASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Gm22058-201ENSMUST00000083393 310 ntBASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Pcdhb6Q91XZ4 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb6Q91XZ4 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb6Q91XZ4 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb6Q91XZ4 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Pcdhb6Q91XZ4 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb6Q91XZ4 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb6Q91XZ4 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb6Q91XZ4 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhb6Q91XZ4 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 Gm13736-201ENSMUST00000119272 253 ntBASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 Gm13315-201ENSMUST00000120376 991 ntBASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 Gm19184-201ENSMUST00000196798 928 ntBASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb6Q91XZ4 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms