Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Gm11637-201ENSMUST00000120601 592 ntBASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Gm27486-201ENSMUST00000184923 80 ntBASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Gm37922-201ENSMUST00000195596 455 ntBASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhga11Q91XY8 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Proscos-202ENSMUST00000178990 666 ntBASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.25□□□□□ -0.45
Pcdhga11Q91XY8 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Gm2231-201ENSMUST00000125661 612 ntBASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhga11Q91XY8 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms