Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb11Q91UZ8 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb11Q91UZ8 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb11Q91UZ8 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb11Q91UZ8 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.95□□□□□ -0.34
Pcdhb11Q91UZ8 Gm12742-201ENSMUST00000117326 410 ntBASIC12.95□□□□□ -0.34
Pcdhb11Q91UZ8 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb11Q91UZ8 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb11Q91UZ8 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.95□□□□□ -0.34
Pcdhb11Q91UZ8 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.95□□□□□ -0.34
Pcdhb11Q91UZ8 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdhb11Q91UZ8 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.95□□□□□ -0.34
Pcdhb11Q91UZ8 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb11Q91UZ8 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb11Q91UZ8 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Pcdhb11Q91UZ8 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdhb11Q91UZ8 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb11Q91UZ8 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhb11Q91UZ8 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhb11Q91UZ8 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb11Q91UZ8 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb11Q91UZ8 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb11Q91UZ8 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb11Q91UZ8 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhb11Q91UZ8 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhb11Q91UZ8 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.95□□□□□ -0.34
Pcdhb11Q91UZ8 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Daam2-202ENSMUST00000224595 1926 ntBASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Gm13392-201ENSMUST00000117708 150 ntBASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Gm43133-201ENSMUST00000197472 463 ntBASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Gm18054-201ENSMUST00000207539 555 ntBASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb11Q91UZ8 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb11Q91UZ8 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb11Q91UZ8 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb11Q91UZ8 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb11Q91UZ8 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb11Q91UZ8 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb11Q91UZ8 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhb11Q91UZ8 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhb11Q91UZ8 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb11Q91UZ8 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb11Q91UZ8 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb11Q91UZ8 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb11Q91UZ8 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdhb11Q91UZ8 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.93□□□□□ -0.34
Pcdhb11Q91UZ8 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb11Q91UZ8 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb11Q91UZ8 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhb11Q91UZ8 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb11Q91UZ8 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb11Q91UZ8 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb11Q91UZ8 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb11Q91UZ8 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhb11Q91UZ8 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pcdhb11Q91UZ8 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.93□□□□□ -0.34
Pcdhb11Q91UZ8 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.93□□□□□ -0.34
Pcdhb11Q91UZ8 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms