Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Gm26464-201ENSMUST00000157094 305 ntBASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Gm35638-201ENSMUST00000220724 652 ntBASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rpa1Q8VEE4 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rpa1Q8VEE4 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rpa1Q8VEE4 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rpa1Q8VEE4 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rpa1Q8VEE4 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rpa1Q8VEE4 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rpa1Q8VEE4 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Rpa1Q8VEE4 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rpa1Q8VEE4 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rpa1Q8VEE4 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rpa1Q8VEE4 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa1Q8VEE4 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
Rpa1Q8VEE4 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa1Q8VEE4 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa1Q8VEE4 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.77□□□□□ -0.37
Rpa1Q8VEE4 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC12.77□□□□□ -0.37
Rpa1Q8VEE4 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.77□□□□□ -0.37
Rpa1Q8VEE4 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.77□□□□□ -0.37
Rpa1Q8VEE4 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.77□□□□□ -0.37
Rpa1Q8VEE4 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa1Q8VEE4 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa1Q8VEE4 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Rpa1Q8VEE4 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.77□□□□□ -0.37
Rpa1Q8VEE4 Gm26315-201ENSMUST00000083890 321 ntBASIC12.77□□□□□ -0.37
Rpa1Q8VEE4 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa1Q8VEE4 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa1Q8VEE4 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa1Q8VEE4 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa1Q8VEE4 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa1Q8VEE4 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Rpa1Q8VEE4 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa1Q8VEE4 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa1Q8VEE4 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa1Q8VEE4 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa1Q8VEE4 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.77□□□□□ -0.37
Rpa1Q8VEE4 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa1Q8VEE4 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa1Q8VEE4 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa1Q8VEE4 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpa1Q8VEE4 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Mir686-201ENSMUST00000102174 109 ntBASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Gm13223-201ENSMUST00000118609 747 ntBASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Gm28975-201ENSMUST00000186412 686 ntBASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Gm37436-201ENSMUST00000193842 1085 ntBASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Gm42550-201ENSMUST00000201553 960 ntBASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Gm19078-201ENSMUST00000206311 727 ntBASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpa1Q8VEE4 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 128.7 ms