Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.5□□□□□ -0.57
Ebf4Q8K4J2 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Gm3436-201ENSMUST00000179930 840 ntBASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ebf4Q8K4J2 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Gm14760-201ENSMUST00000121831 999 ntBASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 AC151286.1-201ENSMUST00000198489 145 ntBASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ebf4Q8K4J2 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms