Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
CopaQ8CIE6 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopaQ8CIE6 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopaQ8CIE6 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.92□□□□□ -0.34
CopaQ8CIE6 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CopaQ8CIE6 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.92□□□□□ -0.34
CopaQ8CIE6 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Gm9257-201ENSMUST00000221254 232 ntBASIC12.92□□□□□ -0.34
CopaQ8CIE6 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.92□□□□□ -0.34
CopaQ8CIE6 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopaQ8CIE6 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Gm11637-201ENSMUST00000120601 592 ntBASIC12.91□□□□□ -0.34
CopaQ8CIE6 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Gm16379-201ENSMUST00000161469 348 ntBASIC12.91□□□□□ -0.34
CopaQ8CIE6 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.91□□□□□ -0.34
CopaQ8CIE6 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Gm8762-201ENSMUST00000193486 339 ntBASIC12.91□□□□□ -0.34
CopaQ8CIE6 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopaQ8CIE6 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.91□□□□□ -0.34
CopaQ8CIE6 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.91□□□□□ -0.34
CopaQ8CIE6 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.91□□□□□ -0.34
CopaQ8CIE6 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Matn2-203ENSMUST00000226766 3252 ntBASIC12.91□□□□□ -0.34
CopaQ8CIE6 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CopaQ8CIE6 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CopaQ8CIE6 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CopaQ8CIE6 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CopaQ8CIE6 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
CopaQ8CIE6 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms